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Sample GSM744635 Query DataSets for GSM744635
Status Public on Jan 15, 2014
Title M2M2-1
Sample type RNA
 
Source name Adult LHM, whole fly
Organism Drosophila melanogaster
Characteristics Sex: F
female.type: Mono
female.pop: Mono2
male.type: Mono
female.pop: Mono2
interaction: M.M
label: M2M2
batch: 1
Extracted molecule total RNA
Extraction protocol Trizol (Invitrogen) extraction and RNeasy (Qiagen) purification
Label biotin
Label protocol Affymetrix GeneChip IVT Labeling Kit, standard manufacturer's protocol
 
Hybridization protocol Affymetrix Eukaryotic Target Hybridization protocol
Scan protocol Affymetrix GeneChip Scanner 3000 with GCOS software
Description PA078_M2M2-1_100301_(Drosophila_2).CEL
Data processing Probesets pre-processed with RMA, as implemented in R/Bioconductor package affy. Data are log2 transformed.
 
Submission date Jun 20, 2011
Last update date Jan 15, 2014
Contact name Paolo Innocenti
E-mail(s) [email protected]
Organization name Uppsala university
Department Dept. of Animal Ecology
Lab Morrow Lab
Street address Norbyvägen 18D
City Uppsala
ZIP/Postal code 75236
Country Sweden
 
Platform ID GPL1322
Series (1)
GSE30089 Post-mating expression of female D. melanogaster genomes experimentally evolved under different post-copulatory sexual selection regimes

Data table header descriptions
ID_REF
VALUE log2 RMA normalized signal

Data table
ID_REF VALUE
1616608_a_at 12.31032047
1622892_s_at 8.567131699
1622893_at 11.50094577
1622894_at 6.194395697
1622895_at 9.430259154
1622896_at 7.29400687
1622897_at 5.221571315
1622898_a_at 10.24601539
1622899_at 4.646186131
1622900_at 3.309470505
1622901_at 4.974577079
1622902_at 7.122847604
1622903_s_at 8.894954555
1622904_at 4.388961728
1622905_at 3.135183312
1622906_at 7.676655042
1622907_at 8.182213638
1622908_a_at 7.211291567
1622909_at 10.76393853
1622910_at 3.581145861

Total number of rows: 18952

Table truncated, full table size 432 Kbytes.




Supplementary file Size Download File type/resource
GSM744635.CEL.gz 1.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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