NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM744647 Query DataSets for GSM744647
Status Public on Jan 15, 2014
Title P1M1-1
Sample type RNA
 
Source name Adult LHM, whole fly
Organism Drosophila melanogaster
Characteristics Sex: F
female.type: Prom
female.pop: Prom1
male.type: Mono
female.pop: Mono1
interaction: P.M
label: P1M1
batch: 1
Extracted molecule total RNA
Extraction protocol Trizol (Invitrogen) extraction and RNeasy (Qiagen) purification
Label biotin
Label protocol Affymetrix GeneChip IVT Labeling Kit, standard manufacturer's protocol
 
Hybridization protocol Affymetrix Eukaryotic Target Hybridization protocol
Scan protocol Affymetrix GeneChip Scanner 3000 with GCOS software
Description PA078_P1M1-1_100301_(Drosophila_2).CEL
Data processing Probesets pre-processed with RMA, as implemented in R/Bioconductor package affy. Data are log2 transformed.
 
Submission date Jun 20, 2011
Last update date Jan 15, 2014
Contact name Paolo Innocenti
E-mail(s) [email protected]
Organization name Uppsala university
Department Dept. of Animal Ecology
Lab Morrow Lab
Street address Norbyvägen 18D
City Uppsala
ZIP/Postal code 75236
Country Sweden
 
Platform ID GPL1322
Series (1)
GSE30089 Post-mating expression of female D. melanogaster genomes experimentally evolved under different post-copulatory sexual selection regimes

Data table header descriptions
ID_REF
VALUE log2 RMA normalized signal

Data table
ID_REF VALUE
1616608_a_at 12.38108588
1622892_s_at 8.438259067
1622893_at 11.53076354
1622894_at 6.525026116
1622895_at 9.351995032
1622896_at 7.411377242
1622897_at 5.292723966
1622898_a_at 10.22735199
1622899_at 4.635771485
1622900_at 3.384246199
1622901_at 5.553836144
1622902_at 7.315091277
1622903_s_at 8.900924597
1622904_at 4.47452659
1622905_at 3.233253542
1622906_at 7.335880028
1622907_at 8.39410169
1622908_a_at 6.935870042
1622909_at 10.58606701
1622910_at 3.506442272

Total number of rows: 18952

Table truncated, full table size 432 Kbytes.




Supplementary file Size Download File type/resource
GSM744647.CEL.gz 1.9 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap