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Sample GSM744649 Query DataSets for GSM744649
Status Public on Jan 15, 2014
Title P1P1-1
Sample type RNA
 
Source name Adult LHM, whole fly
Organism Drosophila melanogaster
Characteristics Sex: F
female.type: Prom
female.pop: Prom1
male.type: Prom
female.pop: Prom1
interaction: P.P
label: P1P1
batch: 1
Extracted molecule total RNA
Extraction protocol Trizol (Invitrogen) extraction and RNeasy (Qiagen) purification
Label biotin
Label protocol Affymetrix GeneChip IVT Labeling Kit, standard manufacturer's protocol
 
Hybridization protocol Affymetrix Eukaryotic Target Hybridization protocol
Scan protocol Affymetrix GeneChip Scanner 3000 with GCOS software
Description PA078_P1P1-1_100301_(Drosophila_2).CEL
Data processing Probesets pre-processed with RMA, as implemented in R/Bioconductor package affy. Data are log2 transformed.
 
Submission date Jun 20, 2011
Last update date Jan 15, 2014
Contact name Paolo Innocenti
E-mail(s) [email protected]
Organization name Uppsala university
Department Dept. of Animal Ecology
Lab Morrow Lab
Street address Norbyvägen 18D
City Uppsala
ZIP/Postal code 75236
Country Sweden
 
Platform ID GPL1322
Series (1)
GSE30089 Post-mating expression of female D. melanogaster genomes experimentally evolved under different post-copulatory sexual selection regimes

Data table header descriptions
ID_REF
VALUE log2 RMA normalized signal

Data table
ID_REF VALUE
1616608_a_at 12.06545933
1622892_s_at 8.620758113
1622893_at 10.13321503
1622894_at 6.372550177
1622895_at 9.378152734
1622896_at 7.46431869
1622897_at 5.304647034
1622898_a_at 10.21490504
1622899_at 4.608750434
1622900_at 3.417565047
1622901_at 5.504105889
1622902_at 7.12508131
1622903_s_at 8.8915776
1622904_at 4.565087755
1622905_at 3.311337332
1622906_at 6.975905704
1622907_at 8.333760256
1622908_a_at 6.96468305
1622909_at 10.65491263
1622910_at 3.484300205

Total number of rows: 18952

Table truncated, full table size 432 Kbytes.




Supplementary file Size Download File type/resource
GSM744649.CEL.gz 1.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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