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Sample GSM744655 Query DataSets for GSM744655
Status Public on Jan 15, 2014
Title P3M3-1
Sample type RNA
 
Source name Adult LHM, whole fly
Organism Drosophila melanogaster
Characteristics Sex: F
female.type: Prom
female.pop: Prom3
male.type: Mono
female.pop: Mono3
interaction: P.M
label: P3M3
batch: 1
Extracted molecule total RNA
Extraction protocol Trizol (Invitrogen) extraction and RNeasy (Qiagen) purification
Label biotin
Label protocol Affymetrix GeneChip IVT Labeling Kit, standard manufacturer's protocol
 
Hybridization protocol Affymetrix Eukaryotic Target Hybridization protocol
Scan protocol Affymetrix GeneChip Scanner 3000 with GCOS software
Description PA078_P3M3-1_100301_(Drosophila_2).CEL
Data processing Probesets pre-processed with RMA, as implemented in R/Bioconductor package affy. Data are log2 transformed.
 
Submission date Jun 20, 2011
Last update date Jan 15, 2014
Contact name Paolo Innocenti
E-mail(s) [email protected]
Organization name Uppsala university
Department Dept. of Animal Ecology
Lab Morrow Lab
Street address Norbyvägen 18D
City Uppsala
ZIP/Postal code 75236
Country Sweden
 
Platform ID GPL1322
Series (1)
GSE30089 Post-mating expression of female D. melanogaster genomes experimentally evolved under different post-copulatory sexual selection regimes

Data table header descriptions
ID_REF
VALUE log2 RMA normalized signal

Data table
ID_REF VALUE
1616608_a_at 12.32142774
1622892_s_at 8.601732001
1622893_at 10.16330018
1622894_at 6.381651205
1622895_at 9.33319711
1622896_at 7.111886836
1622897_at 5.314783879
1622898_a_at 10.42752172
1622899_at 4.493890141
1622900_at 3.210425879
1622901_at 4.991682495
1622902_at 7.202698556
1622903_s_at 8.82952499
1622904_at 4.390141881
1622905_at 3.108694997
1622906_at 7.68691932
1622907_at 8.427168248
1622908_a_at 7.506140822
1622909_at 10.66773291
1622910_at 3.557590584

Total number of rows: 18952

Table truncated, full table size 432 Kbytes.




Supplementary file Size Download File type/resource
GSM744655.CEL.gz 1.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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