GEO Accession viewer

NCBI > GEO > Accession Display

Not logged in | Login

GEO help: Mouse over screen elements for information.

Sample GSM75446

Query DataSets for GSM75446

Status

Public on Aug 08, 2006

Title

MSCs from old (15months) untreated female rats

Sample type

RNA

Source name

Mesenchymal Stromal Cells

Organism

Rattus norvegicus

Characteristics

Wild type, untreated, female, 15m, MSCs.

Extracted molecule

total RNA

Extraction protocol

Total RNA was extracted from the tissue lysate using a Trizol kit.

Label

biotin

Hybridization protocol

standard Affymetrix procedures

Scan protocol

standard Affymetrix procedures

Description

Cells were harvested from 6 rats. Cells were plated and after one week of culturing were trypsinized; single cell suspensions were re-cultured for 7 days.

Data processing

Affymetrix Microarray Suite version 5.0

Submission date

Sep 21, 2005

Last update date

Sep 21, 2005

Contact name

Dafna Benayahu

Organization name

Tel Aviv University

Department

Cellular and Developmental Biology, Sackler Faculty of Medicine

Street address

POB 39040

City

Tel Aviv

ZIP/Postal code

69978

Country

Israel

Platform ID

GPL341

Series (1)

GSE3339

Response of young and aged Mesenchymal Stem Cells to Dexamethasone

Data table header descriptions
ID_REF
VALUE	MAS5-calculated Signal intensity
ABS_CALL	the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)

Data table
ID_REF	VALUE	ABS_CALL
1371081_at	2.9	A
1386919_at	0.1	A
1370846_at	0.1	A
1387955_at	0.3	A
1386838_at	0.3	A
1387936_at	5.3	A
1373316_at	7.5	A
1387967_at	0.7	A
1386378_at	1.6	A
1377098_at	2.2	A
1388302_x_at	0.3	A
1367558_x_at	0.2	A
1377412_at	0.3	A
1388106_x_at	0.3	A
1384598_at	0.2	A
1375405_at	0.4	A
1376563_at	0.1	A
1369321_s_at	0.5	A
1386430_at	1.2	A
1377133_at	3	A

Total number of rows: 15923

Table truncated, full table size 282 Kbytes.

Supplementary data files not provided