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Sample GSM754536 Query DataSets for GSM754536
Status Public on Jul 07, 2011
Title blood 2g T1 ppA
Sample type RNA
 
Source name blood 2g T1 ppA
Organism Homo sapiens
Characteristics donor: A
Sex: M
tissue: blood
treatment: 2g APAP exposure
time: 1h
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using the PAXgene Blood RNA kit (PreAnalytiX/Qiagen) according to the manufacturers protocol (including Dnase) and was globin reduced using the GLOBINclear kit (Ambion) according to the manufacturers protocol
Label biotin
Label protocol We used standard Affymetrix labeling protocols
 
Hybridization protocol We used standard Affymetrix hybridisation rotocols
Scan protocol We used standard Affymetrix scanning parameters
Description globin reduced total RNA
sample 2g APAP exposure
Data processing All samples were normalized by RMA algorithm and analyzed by SAM (FC>1.5 and FDR<10%).
 
Submission date Jul 05, 2011
Last update date Jul 07, 2011
Contact name marlon jetten
E-mail(s) [email protected]
Organization name maastricht university
Street address universiteitssingel 50
City Maastricht
ZIP/Postal code 6200MD
Country Netherlands
 
Platform ID GPL10526
Series (1)
GSE30418 Low dose human APAP exposure

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
1_at 71.65666302
10_at 9.52178874
100_at 257.1402691
1000_at 21.5865088
10000_at 10.82164108
10001_at 189.5462324
10002_at 9.65408306
10003_at 5.478673892
10004_at 86.40534709
100048912_at 11.77370371
100049716_at 59.08489178
10005_at 208.6297983
10006_at 568.6025329
10007_at 216.5861517
10008_at 460.7744604
10009_at 158.4506803
100093630_at 227.0608312
1001_at 10.10114292
10010_at 280.7873337
100101467_at 57.02801219

Total number of rows: 17788

Table truncated, full table size 361 Kbytes.




Supplementary file Size Download File type/resource
GSM754536_ppA_t1_HG-U133_Plus_2_.CEL.gz 4.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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