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GEO accession:
Sample GSM76039
Query DataSets for GSM76039
Status
Public on Sep 26, 2005
Title
Ulcerative Colitis (30 year old black female, SAK_1286498073)
Sample type
RNA
Source name
PBMCs from Ulcerative Colitis subject
Organism
Homo sapiens
Extracted molecule
total RNA
Description
PBMCs from Ulcerative Colitis subject
Subject Disease : Ulcerative Colitis
Subject Age : 30
Subject Race : BLACK
Subject Gender : FEMALE
Submission date
Sep 26, 2005
Last update date
Feb 13, 2017
Contact name
Michael E. Burczynski
E-mail(s)
[email protected]
Phone
484-865-2656
Fax
484-865-9401
Organization name
Wyeth
Department
Pharmacogenomic Biomarkers
Lab
Biomarker Lab
Street address
500 Arcola Road
City
Collegeville
State/province
PA
ZIP/Postal code
19426
Country
USA
Platform ID
GPL96
Series (1)
GSE3365
Comparison of PBMCs in Inflammatory Bowel Disease
Data table header descriptions
ID_REF
VALUE
Affymetrix MAS5 Signal Value normalized to a target value of 100
ABS_CALL
Affymetrix MAS5 Detection value Present (P), Marginal (M), or Absent (A)
DETECTION P-VALUE
Affymetrix MAS5 Detection P-value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-r2-P1-cre-5_at
2795.894043
P
.000244
AFFX-r2-P1-cre-3_at
553.938782
P
.000244
AFFX-r2-Hs28SrRNA-M_at
70.937485
A
.149658
AFFX-r2-Hs28SrRNA-5_at
46.504154
A
.171387
AFFX-r2-Hs28SrRNA-3_at
118.399834
P
.00415
AFFX-r2-Hs18SrRNA-M_x_at
80.852699
P
.00293
AFFX-r2-Hs18SrRNA-5_at
67.453522
A
.095215
AFFX-r2-Hs18SrRNA-3_s_at
144.703384
P
.018555
AFFX-r2-Ec-bioD-5_at
1.413467
A
.969727
AFFX-r2-Ec-bioD-3_at
5493.862305
P
.000244
AFFX-r2-Ec-bioC-5_at
251.943848
P
.000244
AFFX-r2-Ec-bioC-3_at
755.536926
P
.000244
AFFX-r2-Ec-bioB-M_at
4879.807129
P
.000244
AFFX-r2-Ec-bioB-5_at
991.586853
P
.000244
AFFX-r2-Ec-bioB-3_at
4584.592285
P
.000244
AFFX-r2-Bs-thr-M_s_at
21.211582
A
.171387
AFFX-r2-Bs-thr-5_s_at
25.186626
P
.037598
AFFX-r2-Bs-thr-3_s_at
2.947113
A
.888428
AFFX-r2-Bs-phe-M_at
.703084
A
.888428
AFFX-r2-Bs-phe-5_at
.609354
A
.943848
Total number of rows:
22283
Table truncated, full table size
666 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
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