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GEO accession:
Sample GSM76104
Query DataSets for GSM76104
Status
Public on Sep 26, 2005
Title
Crohn's Disease subject (54 year old caucasian male, SAK_1316666829)
Sample type
RNA
Source name
PBMCs from Crohn's Disease subject
Organism
Homo sapiens
Extracted molecule
total RNA
Description
PBMCs from Crohn's Disease subject
Subject Disease : Crohn's Disease
Subject Age : 54
Subject Race : CAUCASIAN
Subject Gender : MALE
Submission date
Sep 26, 2005
Last update date
Feb 13, 2017
Contact name
Michael E. Burczynski
E-mail(s)
[email protected]
Phone
484-865-2656
Fax
484-865-9401
Organization name
Wyeth
Department
Pharmacogenomic Biomarkers
Lab
Biomarker Lab
Street address
500 Arcola Road
City
Collegeville
State/province
PA
ZIP/Postal code
19426
Country
USA
Platform ID
GPL96
Series (1)
GSE3365
Comparison of PBMCs in Inflammatory Bowel Disease
Data table header descriptions
ID_REF
VALUE
Affymetrix MAS5 Signal Value normalized to a target value of 100
ABS_CALL
Affymetrix MAS5 Detection value Present (P), Marginal (M), or Absent (A)
DETECTION P-VALUE
Affymetrix MAS5 Detection P-value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-r2-P1-cre-5_at
1727.57312
P
.000244
AFFX-r2-P1-cre-3_at
349.919495
P
.000244
AFFX-r2-Hs28SrRNA-M_at
54.629959
A
.129639
AFFX-r2-Hs28SrRNA-5_at
21.91271
A
.129639
AFFX-r2-Hs28SrRNA-3_at
53.827782
P
.023926
AFFX-r2-Hs18SrRNA-M_x_at
37.607052
P
.018555
AFFX-r2-Hs18SrRNA-5_at
17.408127
A
.633789
AFFX-r2-Hs18SrRNA-3_s_at
43.903622
A
.095215
AFFX-r2-Ec-bioD-5_at
.953934
A
.850342
AFFX-r2-Ec-bioD-3_at
3799.60376
P
.000244
AFFX-r2-Ec-bioC-5_at
170.090683
P
.000244
AFFX-r2-Ec-bioC-3_at
491.752594
P
.000244
AFFX-r2-Ec-bioB-M_at
2980.640869
P
.000244
AFFX-r2-Ec-bioB-5_at
697.434753
P
.000244
AFFX-r2-Ec-bioB-3_at
3319.156982
P
.000244
AFFX-r2-Bs-thr-M_s_at
24.96414
A
.19458
AFFX-r2-Bs-thr-5_s_at
27.04686
A
.080566
AFFX-r2-Bs-thr-3_s_at
4.444852
A
.80542
AFFX-r2-Bs-phe-M_at
12.009138
P
.023926
AFFX-r2-Bs-phe-5_at
2.887706
A
.753906
Total number of rows:
22283
Table truncated, full table size
667 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
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