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Sample GSM762813 Query DataSets for GSM762813
Status Public on Jul 19, 2011
Title Uncultured Islets- donor-F14
Sample type RNA
 
Source name Uncultured Islets
Organism Homo sapiens
Characteristics sample origin: Pancreatic Islets from individual donors
cell type: islet cells
experiment batch: 2011-03-17
Growth protocol For preparation of islet cells : according to Ouziel-Yahalom L., et al., Biochem Biophys Res Commun (2006) 341:291-298
Extracted molecule total RNA
Extraction protocol according to the manufacturer's protocol (Trizol, Sigma-Aldrich)
Label biotin
Label protocol according to the manufacturer's protocol (Affymetrix, Santa Clara, CA, USA)
 
Hybridization protocol according to the manufacturer's protocol (Affymetrix, Santa Clara, CA, USA)
Scan protocol according to the manufacturer's protocol (Affymetrix, Santa Clara, CA, USA)
Description gene expression data of intact islet cells
Data processing Gene-level analyses was performed. RMA normalization, summarization by mean and batch effect removal, all were done by Partek Genomics suite (version 6.5) Copyright.
 
Submission date Jul 18, 2011
Last update date Jul 19, 2011
Contact name Metsada Pasmanik-Chor
E-mail(s) [email protected]
Organization name Tel Aviv University
Department Biology
Lab Bioinformatics Unit
Street address Ramat Aviv
City Tel Aviv
ZIP/Postal code 69978
Country Israel
 
Platform ID GPL6244
Series (1)
GSE30732 Insulin-producing cells generated from dedifferentiated human pancreatic beta cells expanded in vitro

Data table header descriptions
ID_REF
VALUE RMA-normalized

Data table
ID_REF VALUE
8157281 12.6669
7997332 28.804
8072798 19.7786
7972808 114.922
8157283 293.522
7947375 18.9183
7972810 170.035
8097335 103.839
8047377 31.0733
7997336 -37.2445
8047379 392.524
8047381 562.639
8022856 -116.41
8157300 144.047
8072817 211.625
7997346 109.365
8107348 39.3312
8157308 128.26
8107350 625.179
8072825 76.1142

Total number of rows: 32968

Table truncated, full table size 512 Kbytes.




Supplementary file Size Download File type/resource
GSM762813.CEL.gz 3.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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