|
| Status |
Public on Jan 25, 2012 |
| Title |
Nelore_WG |
| Sample type |
genomic |
| |
|
| Channel 1 |
| Source name |
semen from Nelore_WG
|
| Organism |
Bos taurus |
| Characteristics |
breed: Nelore
gender: Male
tissue: semen
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Qiagen QIAamp DNA Mini Kit
|
| Label |
Cy3
|
| Label protocol |
Labeled by NimbleGen
|
| |
|
| Channel 2 |
| Source name |
whole blood from Hereford L1 Dominette 01449
|
| Organism |
Bos taurus |
| Characteristics |
breed: Hereford L1 Dominette 01449
gender: Female
tissue: whole blood
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Qiagen QIAamp DNA Blood Maxi Kit
|
| Label |
Cy5
|
| Label protocol |
Labeled by NimbleGen
|
| |
|
| |
| Hybridization protocol |
Performed by NimbleGen standard protocol
|
| Scan protocol |
Performed by NimbleGen standard protocol
|
| Description |
Hybridization of test sample Nelore_WG and reference sample Dominette
|
| Data processing |
Spacial corrected and normalized by standard NimbleGen methods
|
| |
|
| Submission date |
Jul 28, 2011 |
| Last update date |
Jan 25, 2012 |
| Contact name |
George Liu |
| E-mail(s) |
[email protected]
|
| Phone |
1-301-504-9843
|
| Fax |
1-301-504-8414
|
| Organization name |
United States Department of Agriculture
|
| Lab |
Bovine Functional Genomics Lab.
|
| Street address |
10300 Baltimore Ave
|
| City |
Beltsville |
| State/province |
MD |
| ZIP/Postal code |
20705-2350 |
| Country |
USA |
| |
|
| Platform ID |
GPL11314 |
| Series (1) |
| GSE31018 |
Copy number variation of individual cattle genomes using next-generation sequencing. |
|
