|
| Status |
Public on Dec 31, 2013 |
| Title |
B370 wild replicate 2 |
| Sample type |
RNA |
| |
|
| Source name |
Seedling 15 days after germination
|
| Organism |
Oryza sativa Indica Group |
| Characteristics |
cultivar: Basmati 370
genotype/variation: Wild type
|
| Growth protocol |
Grown under optimal rice growing conditions
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA was isolated by using TRIzol Reagent (Sigma) RNA samples were processed as recommended by Affymetrix (Affymetrix geneChip Expression Analysis Technical manual; Affymetrix)
|
| Label |
biotin
|
| Label protocol |
Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 8 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
|
| |
|
| Hybridization protocol |
standard Affymetrix procedures
|
| Scan protocol |
standard Affymetrix procedures
|
| Description |
Gene expression profile of wild B370.
|
| Data processing |
GCOS 1.2
|
| |
|
| Submission date |
Aug 04, 2011 |
| Last update date |
Dec 31, 2013 |
| Contact name |
Anjali Awasthi |
| E-mail(s) |
[email protected]
|
| URL |
http://www.iitr.ac.in/departments/BT/pages/index.html
|
| Organization name |
Indian Institute of Technology Roorkee
|
| Department |
Biotechnology
|
| Lab |
Plant Molecular Biology
|
| Street address |
Department of Biotechnology
|
| City |
Roorkee |
| State/province |
Uttarakhand |
| ZIP/Postal code |
247667 |
| Country |
India |
| |
|
| Platform ID |
GPL2025 |
| Series (1) |
| GSE31200 |
Transcription profiling of wild type Basmati 370 and its T-DNA insertional mutant OsAPC6. |
|
