GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM77698
Query DataSets for GSM77698
Status
Public on Nov 01, 2005
Title
aldosterone 2 hours
Sample type
RNA
Source name
heart
Organism
Mus musculus
Characteristics
Male C57BL6, whole heart
Extracted molecule
total RNA
Extraction protocol
Whole hearts were removed upon the sacrifice of the animal and immediately frozen in liquid nitrogen. RNA was extracted using Trizol reagent.
Label
biotin
Label protocol
Approximately 1 µg of total RNA was processed to produce biotinylated cRNA targets.
Hybridization protocol
standard Affymetrix procedures
Scan protocol
standard Affymetrix procedures
Description
mouse whole heart aldosterone-injected group 2 hours
Data processing
Affymetrix GCOS 1.2
Submission date
Oct 12, 2005
Last update date
Aug 28, 2018
Contact name
Alexander Turchin
E-mail(s)
[email protected]
Organization name
Brigham and Women's Hospital
Department
Division of Endocrinology
Street address
221 Longwood Avenue
City
Boston
State/province
MA
ZIP/Postal code
02115
Country
USA
Platform ID
GPL1261
Series (1)
GSE3440
Effect of aldosterone on gene expression in the heart
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
GCOS1.2-calculated Signal intensity
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
Data table
ID_REF
VALUE
ABS_CALL
AFFX-BioB-5_at
4848
P
AFFX-BioB-M_at
7518.3
P
AFFX-BioB-3_at
3536.3
P
AFFX-BioC-5_at
13163.1
P
AFFX-BioC-3_at
12960.5
P
AFFX-BioDn-5_at
13104.9
P
AFFX-BioDn-3_at
69573.9
P
AFFX-CreX-5_at
192587.6
P
AFFX-CreX-3_at
214442.9
P
AFFX-DapX-5_at
109.8
A
AFFX-DapX-M_at
46.4
A
AFFX-DapX-3_at
32.3
A
AFFX-LysX-5_at
22.2
A
AFFX-LysX-M_at
26.9
A
AFFX-LysX-3_at
21.8
A
AFFX-PheX-5_at
143.9
A
AFFX-PheX-M_at
9.6
A
AFFX-PheX-3_at
132.9
A
AFFX-ThrX-5_at
210.2
A
AFFX-ThrX-M_at
46.1
A
Total number of rows:
45101
Table truncated, full table size
853 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM77698.CEL.gz
5.8 Mb
(ftp)
(http)
CEL
GSM77698.EXP.gz
509 b
(ftp)
(http)
EXP
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
