NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM801459 Query DataSets for GSM801459
Status Public on Sep 26, 2011
Title Treg+OX86 rep1
Sample type RNA
 
Source name mouse spleen Treg
Organism Mus musculus
Characteristics strain: C57Bl/6
age: 8-12 wks
protocol: o.n. activation with anti-CD3 + OX86
Extracted molecule total RNA
Extraction protocol RNA was purified with AMBION mirVANA kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion Illumina RNA TotalPrep amplification kit
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Sample name: 5511141042_B
replicate 1
Data processing The data were normalised using quantile normalisation with Illumina BeadStudio Gene Expression Module v3
 
Submission date Sep 26, 2011
Last update date Sep 26, 2011
Contact name Paola Pittoni
E-mail(s) [email protected]
Phone +39 0223903232
Fax +39 0223902630
Organization name IRCCS Istituto Nazionale dei Tumori
Department Dept. Experimental Oncology
Lab Molecular Immunology Unit
Street address Via Amadeo, 42
City Milan
State/province Italy
ZIP/Postal code 20133
Country Italy
 
Platform ID GPL6885
Series (1)
GSE32373 Gene expression analysis of OX40-triggered mouse Treg

Data table header descriptions
ID_REF
VALUE quantile normalized signal
5511141042_B.Detection Pval

Data table
ID_REF VALUE 5511141042_B.Detection Pval
ILMN_2896528 2253.542 0
ILMN_2721178 673.7013 0
ILMN_3033922 749.8276 0
ILMN_3092673 1888.863 0
ILMN_2816356 292.0622 0.2042606
ILMN_2808939 863.9057 0
ILMN_2634564 865.0573 0
ILMN_2737647 292.2496 0.2042606
ILMN_2734484 425.1907 0
ILMN_2952292 332.2294 0.01503759
ILMN_2699078 243.8038 0.9085213
ILMN_1213681 520.4775 0
ILMN_2735413 252.2193 0.8283208
ILMN_2735415 280.9236 0.3546366
ILMN_2891688 1832.586 0
ILMN_2637698 1834.749 0
ILMN_2674228 518.7352 0
ILMN_2601546 290.2661 0.226817
ILMN_1230831 230.2111 0.9824561
ILMN_2848071 271.5669 0.5213032

Total number of rows: 25697

Table truncated, full table size 730 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap