GEO help: Mouse over screen elements for information.
Status
Public on Oct 14, 2006
Title
Wild type olfactory epithelium 2 hpO replicate1
Sample type
RNA
Source name
olfactory epithelium
Organism
Mus musculus Characteristics
Wild type, 6 weeks old
Extracted molecule
total RNA
Extraction protocol
Olfactory epithelium microdissected, frozen in liquid nitrogen;tissue pulverized in Tri-Reagent (Molecular Probes), processed through a QIAshredder column (Qiagen), total RNA extracted and purified with RNeasy Mini-Kit (Qiagen)
Label
biotin
Hybridization protocol
standard Affymetrix procedures
Scan protocol
standard Affymetrix procedures
Description
olfactory epithelium wild type mouse 2 hpO
Data processing
Affymetrix Microarray Suite version 5.0
Submission date
Oct 26, 2005
Last update date
Oct 26, 2005
Contact name
Marilyn L. Getchell
E-mail(s)
[email protected] Organization name
University of Kentucky
Department
Anatomy and Neurobiology
Lab
Sanders-Brown Center on Aging
Street address
800 South Limestone St.
City
Lexington
State/province
KY
ZIP/Postal code
40536-0230
Country
USA
Platform ID
GPL81 Series (1)
GSE3455 Olfactory epithelium of SR-A mutant mice following bilateral olfactory bulbectomy
Data table header descriptions ID_REF VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-MurIL2_at
39.2
A
0.834139
AFFX-MurIL10_at
69.1
A
0.425962
AFFX-MurIL4_at
7.9
A
0.559354
AFFX-MurFAS_at
174.2
P
0.00844
AFFX-BioB-5_at
584
P
0.011384
AFFX-BioB-M_at
1192.3
P
0.00011
AFFX-BioB-3_at
395.5
P
0.000662
AFFX-BioC-5_at
1745.3
P
0.000195
AFFX-BioC-3_at
1286.7
P
0.00006
AFFX-BioDn-5_at
2667.6
P
0.000052
AFFX-BioDn-3_at
10731.6
P
0.000225
AFFX-CreX-5_at
22754.1
P
0.00006
AFFX-CreX-3_at
31522
P
0.000044
AFFX-BioB-5_st
103.5
A
0.262827
AFFX-BioB-M_st
113.2
A
0.559354
AFFX-BioB-3_st
89.2
A
0.544587
AFFX-BioC-5_st
55.6
A
0.724854
AFFX-BioC-3_st
15.3
A
0.852061
AFFX-BioDn-5_st
582.7
A
0.078002
AFFX-BioDn-3_st
290.6
A
0.185131
12488 327 Kbytes .Supplementary data files not provided
