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Sample GSM802941 Query DataSets for GSM802941
Status Public on Jun 30, 2012
Title Cardiac septum_heart_healthy (4158307042_F)
Sample type RNA
 
Source name Cardiac septum_heart_healthy
Organism Homo sapiens
Characteristics gender: female
disease state: control
Extracted molecule total RNA
Extraction protocol Cardiac tissue was put in RNAlater
Label Cy3
Label protocol Illumina TotalPrep RNA Amplification Kit was used
 
Hybridization protocol Performed according to Illumina protocol
Scan protocol Illumina Beadstation 500GX according to Illumina protocol
Description 4158307042_F
Data processing Cubic spline normalization, subtracted background.
Illumina Genomestudio was used
 
Submission date Sep 28, 2011
Last update date Jun 30, 2012
Contact name Nina Gennebäck
E-mail(s) [email protected]
Organization name Umeå University
Department Public health and clinical medicin/medicin
Street address NUS 6M
City Umeå
ZIP/Postal code 901 86
Country Sweden
 
Platform ID GPL6104
Series (1)
GSE32453 Study of transcriptional expression in HCM

Data table header descriptions
ID_REF
VALUE normalized signal
4158307042_F.Detection Pval
4158307042_F.BEAD_STDERR
4158307042_F.Avg_NBEADS

Data table
ID_REF VALUE 4158307042_F.Detection Pval 4158307042_F.BEAD_STDERR 4158307042_F.Avg_NBEADS
ILMN_1809034 23.16268 0.04096045 4.719361 48
ILMN_1660305 146.2105 0.001412429 12.08178 31
ILMN_1792173 154.9402 0.001412429 12.75816 37
ILMN_1762337 -8.905525 0.8333333 4.503607 45
ILMN_1736007 -4.942212 0.6624294 3.597741 44
ILMN_1787689 14.39471 0.08333334 6.899147 44
ILMN_1731507 47.34893 0.01553672 7.932899 23
ILMN_1814316 476.1474 0 30.71341 37
ILMN_1745607 8947.654 0 398.5746 50
ILMN_1757454 -0.3739686 0.4194915 4.315311 34
ILMN_1735045 536.6262 0 22.92407 62
ILMN_1680754 11.75225 0.1073446 7.184711 31
ILMN_1659452 1.179181 0.3658192 3.972393 53
ILMN_1767388 61.10416 0.01271186 8.535707 34
ILMN_1673870 -7.574613 0.7923729 4.087837 34
ILMN_1675204 2.880313 0.3036723 6.95158 31
ILMN_1755321 118.9776 0.004237288 9.897368 45
ILMN_1698554 249.643 0.001412429 18.46413 44
ILMN_1805938 5.899589 0.2076271 4.496752 38
ILMN_1676336 1006.341 0 45.11853 50

Total number of rows: 22184

Table truncated, full table size 923 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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