|
| Status |
Public on Aug 01, 2006 |
| Title |
T60 dilated cardiomyopathy heart biopsy |
| Sample type |
RNA |
| |
|
| Source name |
heart, subendocardial left ventricle
|
| Organism |
Homo sapiens |
| Characteristics |
Dilated cardiomyopathy
|
| Biomaterial provider |
Department of Medicine I, University Hospital Grosshadern, Ludwig-Maximilians-University, Munich, Germany
|
| Extracted molecule |
total RNA |
| Extraction protocol |
total RNA was extracted using Qiagen RNeasy reagents
|
| Label |
biotin
|
| Label protocol |
10 µg of total RNA was processed to produce biotinylated cRNA targets
|
| |
|
| Hybridization protocol |
standard Affymetrix procedures
|
| Scan protocol |
standard Affymetrix procedures
|
| Description |
T60 Dilated cardiomyopathy heart biopsy
|
| Data processing |
Microarray raw data were normalized using robust multi-array average16 (RMA) implemented in Bioconductor's “affy”-package. Probe sets with “absent” calls (as defined by Bioconductor’s affy-package) in more than 50% of tissue samples in either group (NF and DCM) were excluded
|
| |
|
| Submission date |
Nov 08, 2005 |
| Last update date |
Jun 02, 2006 |
| Contact name |
Ruprecht Kuner |
| Organization name |
German Cancer Research Center and National Center of Tumor Diseases
|
| Department |
Molecular Genetics
|
| Lab |
Unit Cancer Genome Research
|
| Street address |
Im Neuenheimer Feld 460
|
| City |
Heidelberg |
| ZIP/Postal code |
69120 |
| Country |
Germany |
| |
|
| Platform ID |
GPL96 |
| Series (1) |
| GSE3585 |
Dilated Cardiomyopathy and Non Failing Biopsies |
|
