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GEO accession:
Sample GSM833437
Query DataSets for GSM833437
Status
Public on Dec 01, 2012
Title
Total RNA at ZT6 Sample 2
Sample type
RNA
Source name
Liver
Organism
Mus musculus
Characteristics
sample type: Total RNA
time: ZT6
tissue: liver
age: 12 weeks
strain: C57BL/6
gender: male
Extracted molecule
total RNA
Extraction protocol
RNA extract by trisol.
Label
Biotin
Label protocol
Affymetrix
Hybridization protocol
Affymetrix
Scan protocol
Affymetrix
Data processing
MAS5
Submission date
Nov 16, 2011
Last update date
Dec 01, 2012
Contact name
Frédéric Gachon
E-mail(s)
[email protected]
Phone
+41 791926057
Organization name
University Of Queensland
Department
Institute for Molecular Bioscience
Street address
306 Carmody Road
City
St Lucia
State/province
QLD
ZIP/Postal code
4072
Country
Australia
Platform ID
GPL1261
Series (1)
GSE33726
The circadian clock coordinates ribosome biogenesis.
Data table header descriptions
ID_REF
VALUE
Signal intensity
ABS_CALL
Present, Marginal or Absent
DETECTION P-VALUE
P-value for the call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
185.303
P
6.02111e-05
AFFX-BioB-M_at
464.553
P
4.42873e-05
AFFX-BioB-3_at
291.412
P
4.42873e-05
AFFX-BioC-5_at
763.885
P
4.42873e-05
AFFX-BioC-3_at
826.468
P
4.42873e-05
AFFX-BioDn-5_at
1319.21
P
4.42873e-05
AFFX-BioDn-3_at
2695.33
P
4.42873e-05
AFFX-CreX-5_at
9013.64
P
5.16732e-05
AFFX-CreX-3_at
9720.86
P
4.42873e-05
AFFX-DapX-5_at
119.045
P
7.00668e-05
AFFX-DapX-M_at
234.472
P
0.000581214
AFFX-DapX-3_at
366.402
P
4.42873e-05
AFFX-LysX-5_at
15.02
P
0.00618711
AFFX-LysX-M_at
36.1684
P
0.00159257
AFFX-LysX-3_at
42.8733
P
4.42873e-05
AFFX-PheX-5_at
25.6962
P
0.000972149
AFFX-PheX-M_at
26.6417
P
0.00556099
AFFX-PheX-3_at
47.7969
P
0.000856509
AFFX-ThrX-5_at
30.4447
P
0.000856509
AFFX-ThrX-M_at
44.5459
P
0.00687065
Total number of rows:
45101
Table truncated, full table size
1376 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM833437_20091014_ZT6_3_4_ARNtotal__Mouse430_2_.CEL.gz
3.4 Mb
(ftp)
(http)
CEL
GSM833437_20091014_ZT6_3_4_ARNtotal__Mouse430_2_.mas5.CHP.gz
397.6 Kb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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