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Sample GSM847080 Query DataSets for GSM847080
Status Public on Mar 01, 2012
Title healthy control fibroblast, biological rep3
Sample type RNA
 
Source name dermal fibroblast from healthy control
Organism Homo sapiens
Characteristics cell type: dermal fibroblast
genotype: healthy control
Treatment protocol Fibroblasts are dissociated with 0.05% trypsin at 37°C, 5% CO2 for 5minutes and collected by centrifugation
Growth protocol Fibroblasts are cultured in DMEM medium supplemented with 10% FBS at 37°C, 5% CO2 until confluence
Extracted molecule total RNA
Extraction protocol as recommended by affymetrix
Label biotin
Label protocol followed affymetrix protocol
 
Hybridization protocol followed affymetrix protocol
Scan protocol followed affymetrix protocol
Description Gene expression data of healthy control human dermal fibroblast
Data processing WebArray software was used to generate log2-transformed gene expression values using the RMA algorithm
 
Submission date Dec 09, 2011
Last update date Mar 01, 2012
Contact name Joseph Gerard Hacia
E-mail(s) [email protected]
Phone 323-442-3030
Organization name University of Southern California
Department Biochemistry and Molecular Biology
Lab Hacia Lab
Street address 2250 Alcazar Street, IGM 261
City Los Angeles
State/province CA
ZIP/Postal code 90089
Country USA
 
Platform ID GPL570
Series (1)
GSE34308 Gene expression profiles of fibroblasts from childhood cerebral adrenoleukodystrophy patients and healthy controls

Data table header descriptions
ID_REF
VALUE log2 transformed RMA normalized

Data table
ID_REF VALUE
1007_s_at 7.304957568
1053_at 5.048503112
117_at 3.267097042
121_at 5.972016635
1255_g_at 2.689401527
1294_at 6.348225383
1316_at 4.220590891
1320_at 4.070358924
1405_i_at 2.99057205
1431_at 2.904040688
1438_at 5.586130959
1487_at 5.131334484
1494_f_at 3.910932564
1552256_a_at 5.401606152
1552257_a_at 5.683752298
1552258_at 2.975849098
1552261_at 3.518635797
1552263_at 3.398405885
1552264_a_at 6.485901495
1552266_at 3.012022122

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM847080_WT5_Fibroblast.CEL.gz 4.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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