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Sample GSM85623 Query DataSets for GSM85623
Status Public on Nov 21, 2006
Title NLP-2
Sample type SAGE
Anchor NlaIII
Tag Count 64434
Tag Length 10
 
Source name lung parenchyma
Organism Homo sapiens
Characteristics lung parenchyma pooled from 4 individuals
Extracted molecule polyA RNA
 
Description lung parenchyma pooled from 4 individuals
 
Submission date Nov 30, 2005
Last update date Nov 19, 2008
Contact name Kim Marie Lonergan
E-mail(s) [email protected]
Phone 604-675-8111
Fax 604-675-8185
Organization name British Columbia Cancer Research Centre
Department Cancer Genetics and Developmental Biology
Lab Dr. Wan L Lam
Street address 675 West 10th Avenue
City Vancouver
State/province British Columbia
ZIP/Postal code V5Z 1L3
Country Canada
 
Platform ID GPL4
Series (2)
GSE3708 Expression profiling of normal lung parenchyma
GSE3754 Identification of novel lung genes in bronchial epithelium by serial analysis of gene expression

Data table header descriptions
TAG 10 nucleotide unique SAGE tag sequence
COUNT raw tag count
TPM tags per million

Data table
TAG COUNT TPM
CTCCCAGCCA 1278 19834.25
GTTCACATTA 793 12307.17
GCCGTGAACA 707 10972.47
ACTTTTTCAA 457 7092.53
TTCATACACC 451 6999.41
TAGGTTGTCT 439 6813.17
CCCATCGTCC 431 6689.02
CCACTGCACT 398 6176.86
CACCTAATTG 389 6037.19
GTTGTGGTTA 387 6006.15
ATAATTCTTT 355 5509.51
TTGGGGTTTC 355 5509.51
GAAATAAAGC 349 5416.40
GCCGTGAGCA 346 5369.84
AGCCCTACAA 279 4330.01
TTCAATAAAA 277 4298.97
GAAATACAGT 268 4159.29
GTGAAACCCC 265 4112.74
TTGGTGAAGG 262 4066.18
CTGGGTTAAT 259 4019.62

Total number of rows: 20003

Table truncated, full table size 373 Kbytes.




Supplementary data files not provided

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