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Sample GSM862622 Query DataSets for GSM862622
Status Public on Dec 31, 2014
Title control #4
Sample type RNA
 
Source name mouse dorsal root ganglion, control
Organism Mus musculus
Characteristics strain: C57/BL6;129Ola mixed
genotype: wildtype
age: 15 days
tissue: dorsal root ganglion
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up with the QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion Illumina TotalPrep RNA Amplif Kit.
 
Hybridization protocol Standard Illumina hybridization protocol.
Scan protocol Standard Illumina scanning protocol.
Description 4936640006_G
Replicate 4 of 6.
Data processing The data were normalized using quantile normalization with Illumina Genome Studio.
 
Submission date Jan 17, 2012
Last update date Dec 31, 2014
Contact name Hagen Wende
Organization name Heidelberg University
Department Institute of Pharmacology
Lab Siemens
Street address Im Neuenheimer Feld 366
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL6885
Series (1)
GSE35148 Genome-wide analysis of P15 dorsal root ganglion gene expression of control and Isl1-Cre//c-Maf mutant mice

Data table header descriptions
ID_REF
VALUE Quantile-normalized signal intensity
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1248788 27.99586 0.03258145
ILMN_2707227 20.37563 0.06390978
ILMN_2896528 3079.857 0
ILMN_2721178 500.1577 0
ILMN_1227723 248.2058 0
ILMN_3033922 533.9782 0
ILMN_3092673 3326.11 0
ILMN_2730714 5189.134 0
ILMN_3162224 1489.442 0
ILMN_2816356 28.71644 0.03132832
ILMN_2808939 436.0186 0
ILMN_2634564 322.6025 0
ILMN_1216623 412.2251 0
ILMN_1215157 755.8082 0
ILMN_1228777 -7.813269 0.7230576
ILMN_2737647 10.54436 0.160401
ILMN_1216425 -9.964924 0.8258145
ILMN_2734484 872.4355 0
ILMN_2652961 -7.456519 0.7055138
ILMN_2952292 118.7037 0

Total number of rows: 25697

Table truncated, full table size 731 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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