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Sample GSM864249 Query DataSets for GSM864249
Status Public on Apr 01, 2012
Title Induced pluripotent cells [iPS_II2]
Sample type RNA
 
Source name iPSC for patient II-2
Organism Homo sapiens
Characteristics cell type: iPS cells
disease state: Hypertrophic cardiomyopathy
Growth protocol Matrigel coated culture dishes and mTeSR
Extracted molecule total RNA
Extraction protocol Extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol
 
Hybridization protocol Hybridization were followed standard Affymetrix protocol in Affymetrix GeneChip Hybridization Oven 640
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner 3000 7G
Description Gene expression data from iPSC
Data processing The data were analyzed with Affymetrix Expression Console using Affymetrix default analysis settings and RMA as normalization method.
 
Submission date Jan 20, 2012
Last update date Apr 01, 2012
Contact name Leng Han
E-mail(s) [email protected]
Organization name Stanford University
Street address 265 Campus Dr
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Platform ID GPL6244
Series (1)
GSE35229 Expression data from patient iPSC

Data table header descriptions
ID_REF
VALUE log2 RMA

Data table
ID_REF VALUE
7892501 6.355202
7892502 5.886048
7892503 4.817464
7892504 10.22584
7892505 5.050791
7892506 7.056954
7892507 7.542132
7892508 6.968815
7892509 13.11664
7892510 4.921
7892511 5.030571
7892512 8.13592
7892513 4.276085
7892514 12.08727
7892515 11.7435
7892516 5.226939
7892517 7.153538
7892518 4.859832
7892519 7.606364
7892520 10.52092

Total number of rows: 33297

Table truncated, full table size 549 Kbytes.




Supplementary file Size Download File type/resource
GSM864249_iPS-II-2.CEL.gz 4.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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