NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM879452 Query DataSets for GSM879452
Status Public on Jan 31, 2013
Title PC3-GFP-rep 2
Sample type RNA
 
Source name PC3-GFP cells
Organism Homo sapiens
Characteristics cell line: PC3
transgene: GFP
Growth protocol RPMI + 10%FBS + 1% pen-strep
Extracted molecule total RNA
Extraction protocol Qiagene RNeasy kit with genomic DNA elimination following kit protocol. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol standard Illumina Ref8 BeadChip protocol
 
Hybridization protocol standard Illumina Ref8 BeadChip protocol
Scan protocol standard Illumina Ref8 BeadChip protocol
Description PC3 cells expressing GFP control -rep 2
Data processing standard Illumina Ref8 BeadChip protocol
 
Submission date Feb 23, 2012
Last update date Jan 31, 2013
Contact name Wenliang Li
Organization name University of Texas at Houston
Department Brown Foundation Institute of Molecular Medicine
Street address 1825 Pressler Street
City Houston
State/province TX
ZIP/Postal code 77030
Country USA
 
Platform ID GPL6883
Series (1)
GSE36022 Genes regulated by GRK3 in PC3 prostate cancer cells

Data table header descriptions
ID_REF
VALUE average normalization algorithm
PC3-GFP-2.Detection Pval

Data table
ID_REF VALUE PC3-GFP-2.Detection Pval
ILMN_1762337 143.5 0.0256
ILMN_2055271 101 0.08283
ILMN_2383229 76.2 0.35241
ILMN_1806310 72.6 0.43072
ILMN_1779670 85.1 0.18976
ILMN_1717783 62.1 0.84036
ILMN_1814316 66 0.66867
ILMN_2359168 71.4 0.46235
ILMN_1731507 60.3 0.90663
ILMN_1787689 91.4 0.12199
ILMN_1745607 64.7 0.71386
ILMN_2136495 57.3 0.96687
ILMN_1668111 51.2 0.99849
ILMN_2295559 60.3 0.90361
ILMN_1735045 73.5 0.40964
ILMN_1680754 115.5 0.04367
ILMN_2375184 84.4 0.19277
ILMN_1659452 91.9 0.11898
ILMN_1767388 75.8 0.35693
ILMN_1675204 57 0.96837

Total number of rows: 24526

Table truncated, full table size 586 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap