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Sample GSM91619 Query DataSets for GSM91619
Status Public on Jan 11, 2006
Title wildtype-legdisc-rep3
Sample type RNA
 
Source name third instar leg discs
Organism Drosophila melanogaster
Characteristics Third instar wild type leg discs
Extracted molecule total RNA
Extraction protocol Trizol total RNA
Label biotin
Label protocol cDNA synthesis was carried out as described in the Expression Analysis Technical Manual (Affymetrix, two-cycle protocol) using 100 ng of total RNA for each sample. The cRNA reactions were carried out using the BioArray High-Yield Transcript Labeling kit (Enzo).
 
Hybridization protocol Fifteen micrograms of labeled cRNA was fragmented and sequentially hybridized to the Affymetrix Drosophila Genome Array 2 following the manufacturer’s instructions.
Scan protocol Standard Affymetrix protocol.
Description Genome-Wide Identification of Direct Targets of the Drosophila Retinal Determination Protein Eyeless
Data processing dChip
 
Submission date Jan 10, 2006
Last update date Mar 12, 2007
Contact name rui chen
E-mail(s) [email protected]
Phone 7137985194
Organization name Baylor College of Medicine
Department HGSC, Department of Molecular and Human Gentics
Street address One Baylor Plaza
City Houston
State/province TX
ZIP/Postal code 77030
Country USA
 
Platform ID GPL1322
Series (1)
GSE4008 Genome-Wide Identification of Direct Targets of the Drosophila Retinal Determination Protein Eyeless

Data table header descriptions
ID_REF
VALUE probe set value

Data table
ID_REF VALUE
AFFX-BioB-5_at 8.51751
AFFX-BioB-M_at 8.51933
AFFX-BioB-3_at 8.50362
AFFX-BioC-5_at 9.28912
AFFX-BioC-3_at 8.89925
AFFX-BioDn-5_at 10.0919
AFFX-BioDn-3_at 11.6117
AFFX-CreX-5_at 12.7851
AFFX-CreX-3_at 13.2025
AFFX-DapX-5_at 6.91296
AFFX-DapX-M_at 9.27314
AFFX-DapX-3_at 10.9674
AFFX-LysX-5_at 6.91296
AFFX-LysX-M_at 7.69184
AFFX-LysX-3_at 9.03084
AFFX-PheX-5_at 7.34298
AFFX-PheX-M_at 8.11025
AFFX-PheX-3_at 9.01556
AFFX-ThrX-5_at 7.16862
AFFX-ThrX-M_at 7.71151

Total number of rows: 18952

Table truncated, full table size 358 Kbytes.




Supplementary data files not provided

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