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Sample GSM926440 Query DataSets for GSM926440
Status Public on May 06, 2012
Title HSCC_High_664
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: High
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: High
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) [email protected]
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.4434822323794 7492.7 1884.95871357014 0 46
ILMN_2721178 10.6738320399952 2069.1 536.324715043974 0 47
ILMN_3033922 10.7684006773779 2221.5 469.421144986035 0 40
ILMN_3092673 12.4684163913819 7591.4 1825.17547655369 0 37
ILMN_2816356 9.27258899121068 544.5 164.729768129504 0.05263 28
ILMN_2808939 10.900830373457 2448.5 633.588480450837 0 35
ILMN_2634564 10.3042550148004 1528 492.411792352701 0 37
ILMN_2737647 9.20498541370877 496.7 131.199562983266 0.18045 23
ILMN_2734484 11.4845065551759 3802.5 933.253405097994 0 47
ILMN_2952292 9.2399920669696 521.2 137.91 0.10276 36
ILMN_2699078 9.12768151435316 447.3 138.145619825603 0.57519 37
ILMN_1213681 9.76509668934809 931.9 262.665107008906 0 40
ILMN_2735413 9.20685090063521 498 158.346474188723 0.17544 37
ILMN_2735415 9.10516506592797 433.7 126.20623170034 0.69048 30
ILMN_2891688 10.9858855606886 2615.8 684.042289534792 0 48
ILMN_2637698 11.5091155177537 3869.3 680.544817336816 0 29
ILMN_2674228 9.9018796651489 1064.9 328.704382728615 0 41
ILMN_2601546 9.26441055498275 538.8 192.890924545454 0.0589 33
ILMN_1230831 9.28637091209495 554.7 192.616574821587 0.03634 29
ILMN_2848071 9.33627143134917 590.8 172.406629425901 0.01629 30

Total number of rows: 25697

Table truncated, full table size 1532 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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