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Sample GSM926462 Query DataSets for GSM926462
Status Public on May 06, 2012
Title HSCC_Low_676
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) [email protected]
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.5647223032462 6790.1 1448.94259979476 0 47
ILMN_2721178 10.5213645053548 1465 375.048 0 36
ILMN_3033922 10.807117555828 1863.9 413.413 0 49
ILMN_3092673 12.5312332644386 6670.4 1794.35306995251 0 52
ILMN_2816356 9.28227617685659 357.7 119.060608720937 0.02757 29
ILMN_2808939 11.0056916355308 2179.9 555.439011976113 0 41
ILMN_2634564 10.1360856998434 1029.5 385.941380730287 0 35
ILMN_2737647 9.18785270330185 305.6 118.297117969966 0.22055 30
ILMN_2734484 11.5183270449316 3227.2 1075.914 0 49
ILMN_2952292 9.31303401117883 377.4 119.116598138127 0.01003 48
ILMN_2699078 9.10965910832682 271.5 77.5162220183621 0.66165 41
ILMN_1213681 10.0323054143922 932.7 270.039 0 49
ILMN_2735413 9.06647777385031 255.7 82.3340823413974 0.86466 35
ILMN_2735415 9.11472716949664 273.6 107.220015444879 0.63659 32
ILMN_2891688 11.0816217942578 2308.5 624.556004821825 0 39
ILMN_2637698 11.5940306667191 3434.3 1048.72706178729 0 45
ILMN_2674228 10.1348081234335 1028.2 398.451728908283 0 30
ILMN_2601546 9.20600332355131 314.8 91.7573024341932 0.14536 38
ILMN_1230831 9.23044728364621 328.3 102.343954193689 0.07519 40
ILMN_2848071 9.29695019709432 367.1 116.281863680455 0.01504 29

Total number of rows: 25697

Table truncated, full table size 1519 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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