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Sample GSM926463 Query DataSets for GSM926463
Status Public on May 06, 2012
Title HSCC_Low_677
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) [email protected]
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.8820528097864 8496.6 2014.60217257502 0 41
ILMN_2721178 10.8681987911276 1858.6 566.902183300611 0 39
ILMN_3033922 10.9261065839238 1953.3 536.821418164365 0 46
ILMN_3092673 13.0392256410011 9423.8 2059.34312669113 0 58
ILMN_2816356 9.27805647703323 399.9 154.837763352485 0.03634 40
ILMN_2808939 10.8949512638854 1907.2 497.426275944486 0 40
ILMN_2634564 10.3809244259804 1221.8 440.676041055104 0 40
ILMN_2737647 9.24589610560076 386.7 126.426624964839 0.08647 35
ILMN_2734484 11.2892158693303 2612.3 633.961193477172 0 35
ILMN_2952292 9.18272311601428 359.8 86.9774214207342 0.26065 37
ILMN_2699078 9.3530625774135 432.3 144.723237277225 0.00877 48
ILMN_1213681 10.078386494613 922.7 239.135280634205 0 44
ILMN_2735413 9.22090353606805 376.2 134.769686621287 0.13033 37
ILMN_2735415 9.21319711967048 372.7 102.325012455411 0.15539 46
ILMN_2891688 11.2119295236922 2452.3 775.279855911399 0 38
ILMN_2637698 11.5657708536268 3225.4 804.929273865723 0 54
ILMN_2674228 9.86863887166884 753.3 212.729863166881 0 43
ILMN_2601546 9.20655385713002 370 80.8012450399126 0.1792 28
ILMN_1230831 9.12460139142923 335.8 78.7747524654949 0.57769 26
ILMN_2848071 9.21822039235238 375.1 110.281366513115 0.13659 38

Total number of rows: 25697

Table truncated, full table size 1520 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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