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Sample GSM926475 Query DataSets for GSM926475
Status Public on May 06, 2012
Title HSCC_Low_736
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) [email protected]
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 13.2404811320544 9561 2098.27252445434 0 45
ILMN_2721178 11.318359159424 2451.3 553.330300556548 0 26
ILMN_3033922 11.4015986695522 2609.5 589.458459035071 0 48
ILMN_3092673 13.3823317710794 10825 2852.33711920313 0 44
ILMN_2816356 9.23936785212152 518.6 156.175 0.13534 25
ILMN_2808939 10.8028179625044 1681.1 429.534984046701 0 30
ILMN_2634564 10.4263908255199 1276.2 367.118560969069 0 27
ILMN_2737647 9.37639345335895 572.2 169.226630043856 0.01003 31
ILMN_2734484 11.4479204293405 2693.6 706.095954272505 0 35
ILMN_2952292 9.34026746109108 557.7 160.909687728862 0.02256 45
ILMN_2699078 9.2354297596385 517.1 165.181395953055 0.14286 41
ILMN_1213681 10.0515570292627 956 265.068542782805 0 37
ILMN_2735413 9.10671780270752 452.6 158.768222425018 0.71429 33
ILMN_2735415 9.13634442010413 468.9 141.549872624457 0.57519 40
ILMN_2891688 11.3751517131736 2558.1 798.666549017173 0 39
ILMN_2637698 11.6157101171769 3032 531.221040434206 0 50
ILMN_2674228 10.089768442579 983.6 340.733544650362 0 50
ILMN_2601546 9.30001444316046 542.8 151.487732783879 0.05138 31
ILMN_1230831 9.18797370161029 495.2 105.510681184418 0.30201 41
ILMN_2848071 9.18911751484347 495.8 169.293534702303 0.2995 47

Total number of rows: 25697

Table truncated, full table size 1523 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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