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Sample GSM926506 Query DataSets for GSM926506
Status Public on May 06, 2012
Title HSCC_Low_675
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) [email protected]
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 13.0518736384999 8960.1 1711.69215705775 0 53
ILMN_2721178 10.9127608251253 1798.9 548.370100176879 0 47
ILMN_3033922 11.0692584499087 2046.9 537.528176387992 0 51
ILMN_3092673 12.7229855266443 7025.1 1821.11703334629 0 56
ILMN_2816356 9.28734119301968 373.6 124.202444790753 0.03258 23
ILMN_2808939 11.0150887919075 1962.6 571.341707856165 0 31
ILMN_2634564 10.4548012148371 1223.9 409.885877248778 0 47
ILMN_2737647 9.20636033563732 337.4 96.7614132182866 0.16667 33
ILMN_2734484 11.5076187267929 2892.2 738.566525755805 0 47
ILMN_2952292 9.24204685955515 352.4 100.101721703475 0.08145 58
ILMN_2699078 9.31520114571981 386.6 135.184 0.01504 49
ILMN_1213681 10.0933649336631 887.2 309.820742701324 0 47
ILMN_2735413 9.08606079483913 287.3 89.1582779106909 0.80576 30
ILMN_2735415 9.23136142896891 348.1 106.746 0.09524 36
ILMN_2891688 11.3869506876057 2604.1 583.884 0 36
ILMN_2637698 10.7448303948108 1562.5 399.746152731956 0 44
ILMN_2674228 10.1653186385682 945.8 424.650733645899 0 34
ILMN_2601546 9.22975597769631 347.4 97.8232487704227 0.09649 30
ILMN_1230831 9.08950815320205 288.7 86.5887381534111 0.79073 23
ILMN_2848071 9.20957482281493 338.8 119.699483081591 0.15038 26

Total number of rows: 25697

Table truncated, full table size 1518 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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