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Sample GSM94053 Query DataSets for GSM94053
Status Public on Feb 27, 2006
Title Smoker diagnosed with cancer Sample 192
Sample type RNA
 
Source name Bronchial Epithelium
Organism Homo sapiens
Characteristics Sample from smoker diagnosed with cancer
Extracted molecule total RNA
Extraction protocol RNA was extracted by using TRIzol Reagent (Invitrogen) according to the manufacturer's protocol
Label Biotin
Label protocol Affymetrix Suggested Protocol
 
Hybridization protocol Affymetrix Suggested Protocol
Scan protocol Affymetrix Suggested Protocol
Description RNA isolated from bronchial epithelial cells obtained during time of clinical bronchoscopy of cigarette smoking patients with suspect lung cancer
Data processing RMA (Robust Multichip Average) generated expression value
 
Submission date Jan 29, 2006
Last update date Nov 16, 2009
Contact name Avrum Spira
E-mail(s) [email protected]
Phone 617-638-4860
Fax 617-536-8093
URL http://www.pulmonomics.com
Organization name Boston University Medical Center
Department Pulmonary and Critical Care Medicine
Lab Pulmonomics Lab
Street address 715 Albany Street, R304
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
 
Platform ID GPL96
Series (1)
GSE4115 Airway Epithelial Gene Expression Diagnostic for the Evaluation of Smokers with Suspect Lung Cancer

Data table header descriptions
ID_REF Affymetrix Probeset Identifier
VALUE RMA Expression Value, a measure of the abundance of a transcript

Data table
ID_REF VALUE
1007_s_at 8.729045
1053_at 4.237216
117_at 6.181640
121_at 8.360141
1255_g_at 3.895710
1294_at 6.795954
1316_at 5.742795
1320_at 4.461486
1405_i_at 5.503976
1431_at 3.616899
1438_at 6.753036
1487_at 6.946261
1494_f_at 6.890808
1598_g_at 8.359164
160020_at 7.829973
1729_at 6.897615
1773_at 4.878591
177_at 4.952152
179_at 8.564371
1861_at 5.764153

Total number of rows: 22215

Table truncated, full table size 432 Kbytes.




Supplementary data files not provided

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