|
| Status |
Public on Jun 29, 2012 |
| Title |
Pdx1-Cre+;PtenL/W;K-rasG12D/W, Cox-2 KO/KO, biological rep4 |
| Sample type |
RNA |
| |
|
| Source name |
Murine Pdx1-Cre+;PtenL/W;K-rasG12D/W, Cox-2 KO/KO pancreas
|
| Organism |
Mus musculus |
| Characteristics |
strain background: mixed C57/BL/6,129/BALB/c
genotype/variation: Pdx1-Cre+;PtenL/W;K-rasG12D/W,Cox-2 KO/KO
genotype/variation: loss of Pten (Pten +/-) and K-ras activation (K-rasG12D) with COX-2 knockout (Cox-2 KO)
age: older than 8 weeks
tissue: pancreatic tumor
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Roche's MagNA Pure Compact Nucleic Acid Purification System was used for automated RNA isolation.
|
| Label |
biotin
|
| Label protocol |
As recommended by manufacturer
|
| |
|
| Hybridization protocol |
As recommended by manufacturer
|
| Scan protocol |
GeneChip Scanner 3000 7G was used for scanning. Affymetrix GeneChip Command Console software (AGCC 3.2) was used for image processing
|
| Description |
Gene expression data from murine pancreatic ductal adenocarcinomas
|
| Data processing |
Data was normalized by GCRMA (Bioconductor v.2.8/ R v.2.13).
|
| |
|
| Submission date |
Jun 28, 2012 |
| Last update date |
Jun 29, 2012 |
| Contact name |
Linh My Tran |
| E-mail(s) |
[email protected]
|
| Organization name |
University of Los Angeles
|
| Department |
Medicine - Pulmonary & Critical Care
|
| Lab |
Dubinett Lab
|
| Street address |
Box 951690, 37-131 CHS
|
| City |
Los Angeles |
| State/province |
California |
| ZIP/Postal code |
90095-1690 |
| Country |
USA |
| |
|
| Platform ID |
GPL1261 |
| Series (1) |
| GSE38988 |
Cell Intrinsic role of Cox-2 in pancreatic cancer development |
|
