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Status
Public on Aug 06, 2004
Title
nl056
Sample type
RNA
Source name
primary acute lymphoblastic leukemia cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Sample Type: Human Total RNA Project: Evans Sample User: jmorris Experiment User: jmorris Algorithm: Statistical Corner+ Avg:47, Count:32 Corner- Avg:3432, Count:32 BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:49.996475,SFGene:All Background:Avg:40.16,Stdev:0.74,Max:41.3,Min:37.9 Noise:Avg:1.23,Stdev:0.03,Max:1.3,Min:1.1 RawQ:1.76 Keywords = ALL
Submission date
Sep 05, 2003
Last update date
May 28, 2005
Contact name
William E Evans
E-mail(s)
[email protected]
Phone
901-495-4995
Fax
901-495-6869
URL
http://www.stjude.org/leukemia/bio_evans.htm
Organization name
St.Jude Children's Research Hospital
Department
Pharmaceutical Sciences
Lab
Evans
Street address
332 N. Lauderdale St.
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platform ID
GPL96
Series (3)
GSE635
Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE643
ASP sensitive all ALL
GSE651
DNR resistant all ALL
Data table header descriptions
ID_REF
As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE
This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value
Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.
Data table
ID_REF
VALUE
Detection_p_value
1007_s_at
107.7
0.520620
1053_at
645.2
0.073830
117_at
141.4
0.378184
121_at
1070.6
0.011447
1255_g_at
38.3
0.697453
1294_at
1110.0
0.000266
1316_at
344.0
0.019304
1320_at
77.2
0.679170
1405_i_at
163.0
0.745101
1431_at
192.1
0.284747
1438_at
177.3
0.479380
1487_at
389.5
0.302547
1494_f_at
206.8
0.175989
1598_g_at
625.3
0.204022
160020_at
761.6
0.013092
1729_at
331.3
0.339558
1773_at
327.7
0.189687
177_at
43.1
0.581931
179_at
950.9
0.189687
1861_at
430.5
0.039365
Total number of rows: 22283 Table truncated, full table size 560 Kbytes .Supplementary file
Size
Download
File type/resource
GSM9740.CEL.gz
2.9 Mb
(ftp) (http)
CEL