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Status
Public on Aug 06, 2004
Title
nl116
Sample type
RNA
Source name
primary acute lymphoblastic leukemia cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Sample Type: Human Total RNA Project: Evans Sample User: jmorris Experiment User: jmorris Algorithm: Statistical Corner+ Avg:43, Count:32 Corner- Avg:3214, Count:32 BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:64.338776,SFGene:All Background:Avg:47.59,Stdev:1.04,Max:49.6,Min:45.0 Noise:Avg:1.44,Stdev:0.04,Max:1.6,Min:1.3 RawQ:2.02 Keywords = ALL
Submission date
Sep 06, 2003
Last update date
May 28, 2005
Contact name
William E Evans
E-mail(s)
[email protected]
Phone
901-495-4995
Fax
901-495-6869
URL
http://www.stjude.org/leukemia/bio_evans.htm
Organization name
St.Jude Children's Research Hospital
Department
Pharmaceutical Sciences
Lab
Evans
Street address
332 N. Lauderdale St.
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platform ID
GPL96
Series (5)
GSE635
Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE646
PRED sensitive all ALL
GSE649
VCR resistant all ALL
Data table header descriptions
ID_REF
As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE
This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value
Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.
Data table
ID_REF
VALUE
Detection_p_value
1007_s_at
886.5
0.073830
1053_at
272.0
0.458816
117_at
444.0
0.024711
121_at
1254.8
0.013092
1255_g_at
34.5
0.781017
1294_at
541.0
0.073830
1316_at
475.1
0.039365
1320_at
34.3
0.972140
1405_i_at
50.1
0.972234
1431_at
42.1
0.861235
1438_at
424.9
0.267463
1487_at
195.5
0.438361
1494_f_at
314.7
0.150527
1598_g_at
319.8
0.267463
160020_at
1580.3
0.031336
1729_at
69.1
0.810313
1773_at
341.9
0.127645
177_at
290.7
0.339558
179_at
1559.0
0.039365
1861_at
440.8
0.089405
Total number of rows: 22283 Table truncated, full table size 561 Kbytes .Supplementary file
Size
Download
File type/resource
GSM9800.CEL.gz
2.9 Mb
(ftp) (http)
CEL