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| Status |
Public on Mar 08, 2006 |
| Title |
Ecoli_Kanamycin treatment T3 |
| Sample type |
RNA |
| |
|
| Channel 1 |
| Source name |
Escherichia coli MG1655, M9 + glucose, 0 min before treatment
|
| Organism |
Escherichia coli |
| Characteristics |
Escherichia coli MG1655, M9 + glucose
|
| Extracted molecule |
total RNA |
| Label |
Cy3
|
| |
|
| Channel 2 |
| Source name |
Escherichia coli MG1655, 30 min after Kanamycin (100 ug/ml) addition in M9 + glucose
|
| Organism |
Escherichia coli |
| Characteristics |
Escherichia coli MG1655, 20 min after Kanamycin (100 ug/ml) addition in M9 + glucose
|
| Extracted molecule |
total RNA |
| Label |
Cy5
|
| |
|
| |
| Description |
Kanamycin (100 ug/ml) in M9 + glucose, 20 min timepoint vs 0 min glucose, 30 min
|
| Data processing |
Normalized log (2) ratio of Cy5/Cy3, normalized using lowess
|
| |
|
| Submission date |
Mar 07, 2006 |
| Last update date |
Mar 07, 2006 |
| Contact name |
Dipen Sangurdekar |
| E-mail(s) |
[email protected]
|
| Organization name |
Princeton University
|
| Department |
Lewis-Sigler Institute for Integrative Genomics
|
| Street address |
132 Carl Icahn laboratory, Princeton University
|
| City |
Princeton |
| State/province |
NJ |
| ZIP/Postal code |
08544 |
| Country |
USA |
| |
|
| Platform ID |
GPL3503 |
| Series (1) |
| GSE4362 |
Kanamycin treatment (100 ug/ml) in M9 + glucose, timecourse |
|
| Data table header descriptions |
| ID_REF |
|
| VALUE |
Normalized log (2) ratio of Cy5/Cy3 |
| Data table |
| ID_REF |
VALUE |
| 1 |
-0.06073 |
| 2 |
0.02351 |
| 3 |
0.04449 |
| 4 |
-0.2522 |
| 5 |
|
| 6 |
0.4987 |
| 7 |
|
| 8 |
0.6191 |
| 9 |
-0.009495 |
| 10 |
0.04186 |
| 11 |
-0.106 |
| 12 |
|
| 13 |
-0.08116 |
| 14 |
1.862 |
| 15 |
1.829 |
| 16 |
0.5175 |
| 17 |
0.1926 |
| 18 |
-0.2032 |
| 19 |
-0.3005 |
| 20 |
-0.3493 |
Total number of rows: 4405
Table truncated, full table size 49 Kbytes.
| Supplementary data files not provided |
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