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Status
Public on Mar 08, 2006
Title
brain, Left frontal Lobe: Extract10_le2
Sample type
RNA
Source name
brain, Left frontal Lobe
Organism
Homo sapiens Characteristics
tissue: brain, Left frontal Lobe
Extracted molecule
total RNA
Extraction protocol
RNA extraction was performed as described previously (Mischel PS, Shai R, Shi T, et al Identification of molecular subtypes of glioblastoma by gene expression profiling. Oncogene, 2003;22:2361-73) and analyzed on both a spectrophotometer and Agilent 2100 Bioanalyzer (Agilent Technologies, Palo Alto, CA).
Label protocol
Probes were prepared using standard Affymetrix protocols and hybridized to Affymetrix HG-U133A and HG-U133B arrays (Affymetrix, Santa Clara, CA).
Hybridization protocol
Standard Affymetrix protocols were used.
Scan protocol
Standard Affymetrix protocols were used.
Description
AM
Submission date
Mar 08, 2006
Last update date
May 22, 2013
Contact name
Winnie Liang
E-mail(s)
[email protected] Organization name
Translational Genomics
Street address
445 N. Fifth Street
City
Phoenix
State/province
AZ
ZIP/Postal code
85012
Country
USA
Platform ID
GPL97 Series (1)
Data table header descriptions ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS 5 or GCOS software.
ABS_CALL The detection value calculated by the MAS 5 or GCOS software
DETECTION P-VALUE The detection p-value calculated by the MAS 5 or GCOS software
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
3948.6072
P
0.000754
AFFX-BioB-M_at
8180.1436
P
0.000070
AFFX-BioB-3_at
4525.2744
P
0.002275
AFFX-BioC-5_at
11561.051
P
0.000169
AFFX-BioC-3_at
10434.207
P
0.000110
AFFX-BioDn-5_at
8521.371
P
0.000060
AFFX-BioDn-3_at
61016.613
P
0.000095
AFFX-CreX-5_at
88218.28
P
0.000044
AFFX-CreX-3_at
136599.81
P
0.000044
AFFX-DapX-5_at
220.6815
A
0.411380
AFFX-DapX-M_at
475.39874
A
0.205732
AFFX-DapX-3_at
104.910065
A
0.916408
AFFX-LysX-5_at
203.82664
A
0.559354
AFFX-LysX-M_at
66.46645
A
0.891021
AFFX-LysX-3_at
253.07234
A
0.470241
AFFX-PheX-5_at
43.157387
A
0.852061
AFFX-PheX-M_at
80.67009
A
0.860518
AFFX-PheX-3_at
213.67448
A
0.843268
AFFX-ThrX-5_at
93.12986
A
0.868639
AFFX-ThrX-M_at
543.6564
A
0.440646
22645 686 Kbytes .Supplementary file Size Download File type/resource GSM99509.CEL.gz
3.3 Mb
(ftp) (http) CEL
