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Items: 16

1.
Value/Rank Plot

ygjD - Hydrogen peroxide-scavenging enzymes AhpCF, KatE and KatG deficiency

Annotation:
ygjD, DNA-binding/iron metalloprotein/AP endonuclease (multiple annotations exist)
Organism:
Escherichia coli, Escherichia coli str. K-12 substr. MG1655
Reporter:
GPL3154, 1763438_s_at (ID_REF), GDS5163, 1039965 (Gene ID), 916225 (Gene ID), 947578 (Gene ID), 959257 (Gene ID), b3064 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
116094024

GEO DataSets Gene Profile neighbors Chromosome neighbors

2.
Value/Rank Plot

ygjD - Gentamicin effect on fur-deficient cells

Annotation:
ygjD, DNA-binding/iron metalloprotein/AP endonuclease (multiple annotations exist)
Organism:
Escherichia coli, Escherichia coli str. K-12 substr. MG1655
Reporter:
GPL3154, 1763438_s_at (ID_REF), GDS5162, 1039965 (Gene ID), 916225 (Gene ID), 947578 (Gene ID), 959257 (Gene ID), b3064 (ORF)
DataSet type:
Expression profiling by array, transformed count, 12 samples
ID:
116083424

GEO DataSets Gene Profile neighbors Chromosome neighbors

3.
Value/Rank Plot

ygjD - Multiple bactericidal antibiotics

Annotation:
ygjD, DNA-binding/iron metalloprotein/AP endonuclease (multiple annotations exist)
Organism:
Escherichia coli, Escherichia coli str. K-12 substr. MG1655
Reporter:
GPL3154, 1763438_s_at (ID_REF), GDS5160, 1039965 (Gene ID), 916225 (Gene ID), 947578 (Gene ID), 959257 (Gene ID), b3064 (ORF)
DataSet type:
Expression profiling by array, transformed count, 18 samples
ID:
116036124

GEO DataSets Gene Profile neighbors Chromosome neighbors

4.
Value/Rank Plot

ygjD - Escherichia coli response to the arylamide compound PMX 10070: time course

Annotation:
ygjD, DNA-binding/iron metalloprotein/AP endonuclease (multiple annotations exist)
Organism:
Escherichia coli
Reporter:
GPL3154, 1763438_s_at (ID_REF), GDS4815, 1039965 (Gene ID), 916225 (Gene ID), 947578 (Gene ID), 959257 (Gene ID), b3064 (ORF)
DataSet type:
Expression profiling by array, count, 18 samples
ID:
104127624

GEO DataSets Gene Profile neighbors Chromosome neighbors

5.
Value/Rank Plot

ygjD - Escherichia coli O157:H7 response to cinnamaldehyde: time course

Annotation:
ygjD, DNA-binding/iron metalloprotein/AP endonuclease (multiple annotations exist)
Organism:
Escherichia coli, Escherichia coli O157:H7
Reporter:
GPL3154, 1763438_s_at (ID_REF), GDS4321, 1039965 (Gene ID), 916225 (Gene ID), 947578 (Gene ID), 959257 (Gene ID), b3064 (ORF)
DataSet type:
Expression profiling by array, transformed count, 8 samples
ID:
87604824

GEO DataSets Gene Profile neighbors Chromosome neighbors

6.
Value/Rank Plot

ygjD - Increased cell membrane saturated fatty acid effect on Escherichia coli

Annotation:
ygjD, DNA-binding/iron metalloprotein/AP endonuclease (multiple annotations exist)
Organism:
Escherichia coli
Reporter:
GPL3154, 1763438_s_at (ID_REF), GDS3597, 1039965 (Gene ID), 916225 (Gene ID), 947578 (Gene ID), 959257 (Gene ID), b3064 (ORF)
DataSet type:
Expression profiling by array, count, 6 samples
ID:
61897924

GEO DataSets Gene Profile neighbors Chromosome neighbors

7.
Value/Rank Plot

ygjD - Frag1 cells response to ionic and non-ionic hyperosmotic stress

Annotation:
ygjD, DNA-binding/iron metalloprotein/AP endonuclease (multiple annotations exist)
Organism:
Escherichia coli
Reporter:
GPL3154, 1763438_s_at (ID_REF), GDS3421, 1039965 (Gene ID), 916225 (Gene ID), 947578 (Gene ID), 959257 (Gene ID), b3064 (ORF)
DataSet type:
Expression profiling by array, count, 6 samples
ID:
56475824

GEO DataSets Gene Profile neighbors Chromosome neighbors

8.
Value/Rank Plot

ygjD - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
ygjD, DNA-binding/iron metalloprotein/AP endonuclease (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, ygjD_b3064_at (ID_REF), GDS3123, 916225 (Gene ID), 947578 (Gene ID), 959257 (Gene ID), b3064 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49313092

GEO DataSets Gene Profile neighbors Chromosome neighbors

9.
Value/Rank Plot

ygjD - Enterohemorrhagic Escherichia coli response to epinephrine, norepinephrine, and indole

Annotation:
ygjD, DNA-binding/iron metalloprotein/AP endonuclease (multiple annotations exist)
Organism:
Escherichia coli
Reporter:
GPL3154, 1763438_s_at (ID_REF), GDS2879, 1039965 (Gene ID), 916225 (Gene ID), 947578 (Gene ID), 959257 (Gene ID), b3064 (ORF)
DataSet type:
Expression profiling by array, count, 4 samples
ID:
43125824

GEO DataSets Gene Profile neighbors Chromosome neighbors

10.
Value/Rank Plot

ygjD - Escherichia coli biofilm development

Annotation:
ygjD, DNA-binding/iron metalloprotein/AP endonuclease (multiple annotations exist)
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL199, ygjD_b3064_at (ID_REF), GDS2768, 916225 (Gene ID), 947578 (Gene ID), 959257 (Gene ID), b3064 (ORF)
DataSet type:
Expression profiling by array, count, 8 samples
ID:
40289392

GEO DataSets Gene Profile neighbors Chromosome neighbors

11.
Value/Rank Plot

ygjD - Enterohemorrhagic Escherichia coli biofilm response to 7-hydroxyindole and isatin

Annotation:
ygjD, DNA-binding/iron metalloprotein/AP endonuclease (multiple annotations exist)
Organism:
Escherichia coli
Reporter:
GPL3154, 1763438_s_at (ID_REF), GDS2753, 1039965 (Gene ID), 916225 (Gene ID), 947578 (Gene ID), 959257 (Gene ID), b3064 (ORF)
DataSet type:
Expression profiling by array, count, 4 samples
ID:
39792624

GEO DataSets Gene Profile neighbors Chromosome neighbors

12.
Value/Rank Plot

ygjD - Arginine regulon repression and derepression

Annotation:
ygjD, DNA-binding/iron metalloprotein/AP endonuclease (multiple annotations exist)
Organism:
Escherichia coli
Reporter:
GPL3154, 1763438_s_at (ID_REF), GDS2427, 1039965 (Gene ID), 916225 (Gene ID), 947578 (Gene ID), 959257 (Gene ID), b3064 (ORF)
DataSet type:
Expression profiling by array, count, 9 samples
ID:
32388624

GEO DataSets Gene Profile neighbors Chromosome neighbors

13.
Value/Rank Plot

ygjD - Steady-state external pH effect on enteric bacteria

Annotation:
ygjD, DNA-binding/iron metalloprotein/AP endonuclease (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, ygjD_b3064_at (ID_REF), GDS1827, 916225 (Gene ID), 947578 (Gene ID), 959257 (Gene ID), b3064 (ORF)
DataSet type:
Expression profiling by array, count, 15 samples
ID:
20679192

GEO DataSets Gene Profile neighbors Chromosome neighbors

14.
Value/Rank Plot

ygjD - RyhB small regulatory RNA effect on global iron use

Annotation:
ygjD, DNA-binding/iron metalloprotein/AP endonuclease (multiple annotations exist)
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL199, ygjD_b3064_at (ID_REF), GDS1494, 916225 (Gene ID), 947578 (Gene ID), 959257 (Gene ID), b3064 (ORF)
DataSet type:
Expression profiling by array, count, 12 samples
ID:
14987892

GEO DataSets Gene Profile neighbors Chromosome neighbors

15.
Value/Rank Plot

ygjD - Carbon source quality effect on gene expression

Annotation:
ygjD, DNA-binding/iron metalloprotein/AP endonuclease (multiple annotations exist)
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL199, ygjD_b3064_at (ID_REF), GDS1099, 916225 (Gene ID), 947578 (Gene ID), 959257 (Gene ID), b3064 (ORF)
DataSet type:
Expression profiling by array, count, 15 samples
ID:
10148892

GEO DataSets Gene Profile neighbors Chromosome neighbors

16.
Value/Rank Plot

ygjD - Oxygen deprivation expression profiling of various mutants

Annotation:
ygjD, DNA-binding/iron metalloprotein/AP endonuclease (multiple annotations exist)
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL199, ygjD_b3064_at (ID_REF), GDS680, 916225 (Gene ID), 947578 (Gene ID), 959257 (Gene ID), b3064 (ORF)
DataSet type:
Expression profiling by array, count, 43 samples
ID:
5411192

GEO DataSets Gene Chromosome neighbors

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