GEO Profile Links for PMC (Select 107404) - GEO Profiles

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Links from PMC

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Select item 355210561.

rhsE - Ampicillin treatment: time course

Annotation:: rhsE, pseudo

Organism:: Escherichia coli

Reporter:: GPL3503, 1456 (ID_REF), GDS2579, B1456 (ORF)

DataSet type:: Expression profiling by array, log2 ratio, 6 samples

ID:: 35521056

GEO DataSets Gene Profile neighbors Chromosome neighbors

Select item 210878342.

rhsA - High temperature adapted strains

Annotation:: rhsA, Rhs protein with putative toxin 55 domain; putative polysaccharide synthesis/export protein; putative neighboring cell growth inhibitor

Organism:: Escherichia coli

Reporter:: GPL189, 4034 (ID_REF), GDS1848, b3593 (ORF)

DataSet type:: Expression profiling by array, count, 12 samples

ID:: 21087834

GEO DataSets Gene Profile neighbors Chromosome neighbors

Select item 355854563.

rhsE - Wild type cells at various growth rates

Annotation:: rhsE, pseudo

Organism:: Escherichia coli

Reporter:: GPL3503, 1456 (ID_REF), GDS2593, B1456 (ORF)

DataSet type:: Expression profiling by array, log2 ratio, 5 samples

ID:: 35585456

GEO DataSets Gene Profile neighbors Chromosome neighbors

Select item 210877924.

rhsB - High temperature adapted strains

Annotation:: rhsB, Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

Organism:: Escherichia coli

Reporter:: GPL189, 3992 (ID_REF), GDS1848, b3482 (ORF)

DataSet type:: Expression profiling by array, count, 12 samples

ID:: 21087792

GEO DataSets Gene Profile neighbors Chromosome neighbors

Select item 202138925.

rhsC - Heat shock factor sigma32 overexpression: time course

Annotation:: rhsC, Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor

Organism:: Escherichia coli

Reporter:: GPL3500, 11_15_12 (ID_REF), GDS1804, b0700 (ORF)

DataSet type:: Expression profiling by array, log2 ratio, 16 samples

ID:: 20213892

GEO DataSets Gene Profile neighbors Chromosome neighbors

Select item 1041236776.

rhsA - Escherichia coli response to the arylamide compound PMX 10070: time course

Annotation:: rhsA, rhsA protein in rhs element (multiple annotations exist)

Organism:: Escherichia coli

Reporter:: GPL3154, 1759446_s_at (ID_REF), GDS4815, 915028 (Gene ID), 915590 (Gene ID), 917098 (Gene ID), 945306 (Gene ID), 947994 (Gene ID), 948120 (Gene ID), 957783 (Gene ID), 960200 (Gene ID), 960959 (Gene ID), Z5485 (ORF)

DataSet type:: Expression profiling by array, count, 18 samples

ID:: 104123677

GEO DataSets Gene Profile neighbors Chromosome neighbors

Select item 323846777.

rhsA - Arginine regulon repression and derepression

Annotation:: rhsA, rhsA protein in rhs element (multiple annotations exist)

Organism:: Escherichia coli

Reporter:: GPL3154, 1759446_s_at (ID_REF), GDS2427, 915028 (Gene ID), 915590 (Gene ID), 917098 (Gene ID), 945306 (Gene ID), 947994 (Gene ID), 948120 (Gene ID), 957783 (Gene ID), 960200 (Gene ID), 960959 (Gene ID), Z5485 (ORF)

DataSet type:: Expression profiling by array, count, 9 samples

ID:: 32384677

GEO DataSets Gene Profile neighbors Chromosome neighbors

Select item 619009188.

rhsC - Increased cell membrane saturated fatty acid effect on Escherichia coli

Annotation:: rhsC, rhsC protein in rhs element, interrupted (multiple annotations exist)

Organism:: Escherichia coli

Reporter:: GPL3154, 1766469_s_at (ID_REF), GDS3597, 945306 (Gene ID), 957783 (Gene ID), b0701 (ORF)

DataSet type:: Expression profiling by array, count, 6 samples

ID:: 61900918

GEO DataSets Gene Profile neighbors Chromosome neighbors

Select item 355414829.

rhsB - Kanamycin treatment: time course

Annotation:: rhsB, Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

Organism:: Escherichia coli

Reporter:: GPL3503, 3482 (ID_REF), GDS2583, B3482 (ORF)

DataSet type:: Expression profiling by array, log2 ratio, 6 samples

ID:: 35541482

GEO DataSets Gene Profile neighbors Chromosome neighbors

Select item 3555068210.

rhsB - Recovery from stationary phase: time course (III)

Annotation:: rhsB, Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

Organism:: Escherichia coli

Reporter:: GPL3503, 3482 (ID_REF), GDS2585, B3482 (ORF)

DataSet type:: Expression profiling by array, log2 ratio, 7 samples

ID:: 35550682

GEO DataSets Gene Profile neighbors Chromosome neighbors

Select item 3552768211.

rhsB - Recovery from stationary phase: time course (I)

Annotation:: rhsB, Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

Organism:: Escherichia coli

Reporter:: GPL3503, 3482 (ID_REF), GDS2580, B3482 (ORF)

DataSet type:: Expression profiling by array, log2 ratio, 7 samples

ID:: 35527682

GEO DataSets Gene Profile neighbors Chromosome neighbors

Select item 3555528212.

rhsB - Recovery from stationary phase: time course (IV)

Annotation:: rhsB, Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

Organism:: Escherichia coli

Reporter:: GPL3503, 3482 (ID_REF), GDS2586, B3482 (ORF)

DataSet type:: Expression profiling by array, log2 ratio, 7 samples

ID:: 35555282

GEO DataSets Gene Profile neighbors Chromosome neighbors

Select item 2734847313.

rhsE - Indole-3-acetic acid effect on Escherichia coli

Annotation:: rhsE, pseudo

Organism:: Escherichia coli, Escherichia coli K-12

Reporter:: GPL189, 3173 (ID_REF), GDS2181, b1456 (ORF)

DataSet type:: Expression profiling by array, count, 12 samples

ID:: 27348473

GEO DataSets Gene Profile neighbors Chromosome neighbors

Select item 1367180214.

rhsC - Cisplatin effect on DNA adenine methyltransferase and mismatch repair mutants

Annotation:: rhsC, Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor

Organism:: Escherichia coli, Escherichia coli K-12

Reporter:: GPL73, rhsC_b0700_st (ID_REF), GDS1400, b0700 (ORF)

DataSet type:: Expression profiling by array, transformed count, 24 samples

ID:: 13671802

GEO DataSets Gene Profile neighbors Chromosome neighbors

Select item 4312187715.

rhsA - Enterohemorrhagic Escherichia coli response to epinephrine, norepinephrine, and indole

Annotation:: rhsA, rhsA protein in rhs element (multiple annotations exist)

Organism:: Escherichia coli

Reporter:: GPL3154, 1759446_s_at (ID_REF), GDS2879, 915028 (Gene ID), 915590 (Gene ID), 917098 (Gene ID), 945306 (Gene ID), 947994 (Gene ID), 948120 (Gene ID), 957783 (Gene ID), 960200 (Gene ID), 960959 (Gene ID), Z5485 (ORF)