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Items: 1 to 20 of 669

1.
Value/Rank Plot

phnF - DNA gyrase inhibition effect on recA, topA, and dnaC mutants: time course

Annotation:
phnF, putative DNA-binding transcriptional regulator of phosphonate uptake and biodegradation
Organism:
Escherichia coli
Reporter:
GPL1436, 2536 (ID_REF), GDS1963, b4102 (ORF)
DataSet type:
Expression profiling by array, log ratio, 16 samples
ID:
22755536

GEO DataSets Gene Profile neighbors Chromosome neighbors

2.
Value/Rank Plot

phnI - Indole-3-acetic acid effect on Escherichia coli

Annotation:
phnI, ribophosphonate triphosphate synthase complex putative catalytic subunit
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL189, 2266 (ID_REF), GDS2181, b4099 (ORF)
DataSet type:
Expression profiling by array, count, 12 samples
ID:
27347566

GEO DataSets Gene Profile neighbors Chromosome neighbors

3.
Value/Rank Plot

phnJ - UV exposure time course (ecoli_4.3)

Annotation:
phnJ, carbon-phosphorus lyase, SAM-dependent
Organism:
Escherichia coli
Reporter:
GPL17, 1354 (ID_REF), GDS99, B4098 (ORF)
DataSet type:
Expression profiling by array, log ratio, 7 samples
ID:
566754

GEO DataSets Gene Profile neighbors Chromosome neighbors

4.
Value/Rank Plot

phnH - Wild type cells at various growth rates

Annotation:
phnH, ribophosphonate triphosphate synthase subunit
Organism:
Escherichia coli
Reporter:
GPL3503, 4100 (ID_REF), GDS2593, B4100 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 5 samples
ID:
35588100

GEO DataSets Gene Profile neighbors Chromosome neighbors

5.
Value/Rank Plot

phnL - Wild type cells at various growth rates

Annotation:
phnL, ribophosphonate triphosphate synthase subunit; putative ABC transporter-related ATPase
Organism:
Escherichia coli
Reporter:
GPL3503, 4096 (ID_REF), GDS2593, B4096 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 5 samples
ID:
35588096

GEO DataSets Gene Profile neighbors Chromosome neighbors

6.
Value/Rank Plot

phnK - Frag1 cells response to ionic and non-ionic hyperosmotic stress

Annotation:
phnK, phosphonate C-P lyase system protein PhnK (multiple annotations exist)
Organism:
Escherichia coli
Reporter:
GPL3154, 1763810_s_at (ID_REF), GDS3421, 914255 (Gene ID), 948611 (Gene ID), 960026 (Gene ID), b4097 (ORF)
DataSet type:
Expression profiling by array, count, 6 samples
ID:
56476194

GEO DataSets Gene Profile neighbors Chromosome neighbors

7.
Value/Rank Plot

phnC - Wild type cells at various growth rates

Annotation:
phnC, phosphonate ABC transporter ATPase
Organism:
Escherichia coli
Reporter:
GPL3503, 4106 (ID_REF), GDS2593, B4106 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 5 samples
ID:
35588106

GEO DataSets Gene Profile neighbors Chromosome neighbors

8.
Value/Rank Plot

phnN - Frag1 cells response to ionic and non-ionic hyperosmotic stress

Annotation:
phnN, ribose 1,5-bisphosphokinase (multiple annotations exist)
Organism:
Escherichia coli
Reporter:
GPL3154, 1762533_s_at (ID_REF), GDS3421, 914257 (Gene ID), 948608 (Gene ID), 960029 (Gene ID), b4094 (ORF)
DataSet type:
Expression profiling by array, count, 6 samples
ID:
56474923

GEO DataSets Gene Profile neighbors Chromosome neighbors

9.
Value/Rank Plot

phnI - Benzalkonium chloride adapted E. coli K12

Annotation:
phnI, ribophosphonate triphosphate synthase complex putative catalytic subunit
Organism:
Escherichia coli
Reporter:
GPL189, 2266 (ID_REF), GDS2825, b4099 (ORF)
DataSet type:
Expression profiling by array, count, 22 samples
ID:
41748966

GEO DataSets Gene Profile neighbors Chromosome neighbors

10.
Value/Rank Plot

phnH - Recovery from stationary phase: time course (IV)

Annotation:
phnH, ribophosphonate triphosphate synthase subunit
Organism:
Escherichia coli
Reporter:
GPL3503, 4100 (ID_REF), GDS2586, B4100 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 7 samples
ID:
35555900

GEO DataSets Gene Profile neighbors Chromosome neighbors

11.
Value/Rank Plot

phnF - NOX overexpressing cells at various growth rates

Annotation:
phnF, putative DNA-binding transcriptional regulator of phosphonate uptake and biodegradation
Organism:
Escherichia coli
Reporter:
GPL3503, 4102 (ID_REF), GDS2592, B4102 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 5 samples
ID:
35583502

GEO DataSets Gene Profile neighbors Chromosome neighbors

12.
Value/Rank Plot

phnP - NOX overexpressing cells at various growth rates

Annotation:
phnP, 5-phospho-alpha-D-ribosyl 1,2-cyclic phosphate phosphodiesterase
Organism:
Escherichia coli
Reporter:
GPL3503, 4092 (ID_REF), GDS2592, B4092 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 5 samples
ID:
35583492

GEO DataSets Gene Profile neighbors Chromosome neighbors

13.
Value/Rank Plot

phnN - Anaerobic to aerobic transition: time course

Annotation:
phnN, ribose 1,5-bisphosphokinase
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL534, 2.4.16.4 (ID_REF), GDS2364, b4094 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 4 samples
ID:
30884290

GEO DataSets Gene Profile neighbors Chromosome neighbors

14.
Value/Rank Plot

phnG - Escherichia coli O157:H7 response to cinnamaldehyde: time course

Annotation:
phnG, PhnG protein (multiple annotations exist)
Organism:
Escherichia coli, Escherichia coli O157:H7
Reporter:
GPL3154, 1762347_s_at (ID_REF), GDS4321, 1038038 (Gene ID), 914252 (Gene ID), 948618 (Gene ID), 960022 (Gene ID), b4101 (ORF)
DataSet type:
Expression profiling by array, transformed count, 8 samples
ID:
87603738

GEO DataSets Gene Profile neighbors Chromosome neighbors

15.
Value/Rank Plot

phnG - Frag1 cells response to ionic and non-ionic hyperosmotic stress

Annotation:
phnG, PhnG protein (multiple annotations exist)
Organism:
Escherichia coli
Reporter:
GPL3154, 1762347_s_at (ID_REF), GDS3421, 1038038 (Gene ID), 914252 (Gene ID), 948618 (Gene ID), 960022 (Gene ID), b4101 (ORF)
DataSet type:
Expression profiling by array, count, 6 samples
ID:
56474738

GEO DataSets Gene Profile neighbors Chromosome neighbors

16.
Value/Rank Plot

phnM - Calcium chloride and glycerol wash effect: time course

Annotation:
phnM, ribophosphonate triphosphate hydrolase
Organism:
Escherichia coli
Reporter:
GPL3503, 4095 (ID_REF), GDS2578, B4095 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 6 samples
ID:
35519095

GEO DataSets Gene Profile neighbors Chromosome neighbors

17.
Value/Rank Plot

phnI - UV exposure time course (ecoli_8.0)

Annotation:
phnI, ribophosphonate triphosphate synthase complex putative catalytic subunit
Organism:
Escherichia coli
Reporter:
GPL18, 5563 (ID_REF), GDS100, B4099 (ORF)
DataSet type:
Expression profiling by array, log ratio, 8 samples
ID:
576052

GEO DataSets Gene Profile neighbors Chromosome neighbors

18.
Value/Rank Plot

phnO - Stationary phase: time course

Annotation:
phnO, aminoalkylphosphonate N-acetyltransferase
Organism:
Escherichia coli
Reporter:
GPL3503, 4093 (ID_REF), GDS2600, B4093 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 6 samples
ID:
35620293

GEO DataSets Gene Profile neighbors Chromosome neighbors

19.
Value/Rank Plot

phnD - Recovery from stationary phase: time course (V)

Annotation:
phnD, phosphonate ABC transporter periplasmic binding protein
Organism:
Escherichia coli
Reporter:
GPL3503, 4105 (ID_REF), GDS2587, B4105 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 7 samples
ID:
35560505

GEO DataSets Gene Profile neighbors Chromosome neighbors

20.
Value/Rank Plot

phnD - Ampicillin treatment: time course

Annotation:
phnD, phosphonate ABC transporter periplasmic binding protein
Organism:
Escherichia coli
Reporter:
GPL3503, 4105 (ID_REF), GDS2579, B4105 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 6 samples
ID:
35523705

GEO DataSets Gene Profile neighbors Chromosome neighbors

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