GTR Test Accession:
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GTR000327201.5
Last updated in GTR:
2020-10-22
View version history
GTR000327201.5,
last updated:
2020-10-22
GTR000327201.4,
last updated:
2019-10-10
GTR000327201.3,
last updated:
2018-10-10
GTR000327201.2,
last updated:
2015-10-26
GTR000327201.1,
registered in GTR:
2015-10-20
Last annual review date for the lab: 2024-10-06
LinkOut
At a Glance
Test purpose:
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Diagnosis
Conditions (2):
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Hypertriglyceridemia 1;
Hyperlipoproteinemia, type I
Genes (7):
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Methods (1):
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Molecular Genetics - Sequence analysis of the entire coding region: Next-Generation (NGS)/Massively parallel sequencing (MPS)
Target population: Help
Not provided
Clinical validity:
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Not provided
Clinical utility:
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Not provided
Ordering Information
Offered by:
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Cardiovascular Genetics Laboratory
Specimen Source:
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- Peripheral (whole) blood
Who can order: Help
- Health Care Provider
Lab contact:
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Amanda Hooper, PhD, BSc (Hon 1st), Laboratory Contact
[email protected]
[email protected]
Contact Policy:
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Laboratory can only accept contact from health care providers. Patients/families are encouraged to discuss genetic testing options with their health care provider.
How to Order:
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Please contact the laboratory for further information.
Test service:
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Clinical Testing/Confirmation of Mutations Identified Previously
Informed consent required:
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Decline to answer
Pre-test genetic counseling required:
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Decline to answer
Post-test genetic counseling required:
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Decline to answer
Recommended fields not provided:
Test Order Code,
Test strategy,
Test development
Conditions
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Total conditions: 2
Condition/Phenotype | Identifier |
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Test Targets
Genes
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Total genes: 7
Gene | Associated Condition | Germline or Somatic | Allele (Lab-provided) | Variant in NCBI |
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Methodology
Total methods: 1
Method Category
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Test method
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Instrument *
Sequence analysis of the entire coding region
Next-Generation (NGS)/Massively parallel sequencing (MPS)
* Instrument: Not provided
Clinical Information
Test purpose:
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Diagnosis
Recommended fields not provided:
Clinical validity,
Clinical utility,
Target population,
What is the protocol for interpreting a variation as a VUS?,
Are family members with defined clinical status recruited to assess significance of VUS without charge?,
Will the lab re-contact the ordering physician if variant interpretation changes?,
Is research allowed on the sample after clinical testing is complete?,
Sample negative report,
Sample positive report
Technical Information
Test Confirmation:
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Positive results confirmed using bidirectional Sanger sequencing.
Availability:
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Tests performed
Entire test performed in-house
Entire test performed in-house
Analytical Validity:
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In patients with severe hypertriglyceridaemia (fasting plasma triglycerides >10 mmol/L), >40% carry one or more copies of rare coding variants in LPL, APOC2 or APOA5.
View citations (1)
- Wang J, Ban MR, Zou GY, Cao H, Lin T, Kennedy BA, Anand S, Yusuf S, Huff MW, Pollex RL, Hegele RA. Polygenic determinants of severe hypertriglyceridemia. Hum Mol Genet. 2008;17(18):2894-9. doi:10.1093/hmg/ddn188. Epub 2008 Jul 01. PMID: 18596051.
Proficiency testing (PT):
Is proficiency testing performed for this test?
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No
No
Recommended fields not provided:
Assay limitations,
Description of internal test validation method,
PT Provider,
Description of PT method,
Major CAP category, CAP category, CAP test list
Regulatory Approval
FDA Review:
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Not provided
Additional Information
Reviews:
Clinical resources:
Molecular resources:
Consumer resources:
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NIH makes no endorsements of tests or laboratories listed in GTR. GTR is not a substitute for medical advice.
Patients and consumers
with specific questions about a genetic test should contact a health care provider or a genetics professional.