GTR Test Accession:
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GTR000509478.11
Last updated in GTR:
2024-04-15
View version history
GTR000509478.11,
last updated:
2024-04-15
GTR000509478.10,
last updated:
2022-06-15
GTR000509478.9,
last updated:
2021-12-14
GTR000509478.8,
last updated:
2020-12-17
GTR000509478.7,
last updated:
2018-01-03
GTR000509478.6,
last updated:
2017-12-29
GTR000509478.5,
last updated:
2017-01-05
GTR000509478.4,
last updated:
2017-01-03
GTR000509478.3,
last updated:
2016-01-04
GTR000509478.2,
last updated:
2015-01-05
GTR000509478.1,
registered in GTR:
2014-01-18
Last annual review date for the lab: 2024-04-15
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At a Glance
Test purpose:
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Diagnosis;
Mutation Confirmation;
Risk Assessment; ...
Conditions (1):
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Hereditary thrombophilia
Genes (11):
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Methods (2):
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Molecular Genetics - Sequence analysis of select exons: High Resolution Melting; ...
Target population: Help
Individuals with personal or family history of thromboembolic diseases, pulmonary …
Clinical validity:
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Not provided
Clinical utility:
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Establish or confirm diagnosis;
Guidance for management
Ordering Information
Offered by:
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Test short name:
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TromboGene
Specimen Source:
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- Buccal swab
- Isolated DNA
- Peripheral (whole) blood
- Saliva
- View specimen requirements
Who can order: Help
- Genetic Counselor
- Health Care Provider
- Licensed Physician
Test Order Code:
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Genetic study of Hereditary Thrombophilia
Contact Policy:
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Laboratory can only accept contact from health care providers. Patients/families are encouraged to discuss genetic testing options with their health care provider.
How to Order:
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Test service:
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Clinical Testing/Confirmation of Mutations Identified Previously
OrderCode: TromboGene
OrderCode: TromboGene
Test additional service:
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Custom mutation-specific/Carrier testing
OrderCode: TromboGene
OrderCode: TromboGene
Informed consent required:
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Yes
Pre-test genetic counseling required:
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Yes
Post-test genetic counseling required:
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Yes
Recommended fields not provided:
Lab contact for this test,
Test strategy,
Test development
Conditions
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Total conditions: 1
Condition/Phenotype | Identifier |
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Test Targets
Genes
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Total genes: 11
Gene | Associated Condition | Germline or Somatic | Allele (Lab-provided) | Variant in NCBI |
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Methodology
Total methods: 2
Method Category
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Test method
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Instrument
Sequence analysis of select exons
High Resolution Melting
Targeted variant analysis
Allele-specific primer extension (ASPE)
MassARRAY® System by Agena Bioscience
Clinical Information
Test purpose:
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Diagnosis;
Mutation Confirmation;
Risk Assessment;
Screening;
Therapeutic management
Clinical utility:
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Target population:
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Individuals with personal or family history of thromboembolic diseases, pulmonary thromboembolism, stroke or myocardial infarction at young ages , Family history of thrombotic vascular diseases (TVD), No history of TVD but exposed to environmental risk factors (prolonged immobilization: long travels, orthopedic and major surgeries; muscle and vessels injuries, pregnancy and …
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Variant Interpretation:
What is the protocol for interpreting a variation as a VUS?
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Not applicable
Not applicable
Are family members with defined clinical status recruited to assess significance of VUS without charge?
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Not applicable
Not applicable
Will the lab re-contact the ordering physician if variant interpretation changes?
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Yes. The tests are constantly being updated in terms of content and genetic interest. Therefore, the doctor will be contacted if there are significant changes in the rules generated by the results obtained for the genes studied.
Yes. The tests are constantly being updated in terms of content and genetic interest. Therefore, the doctor will be contacted if there are significant changes in the rules generated by the results obtained for the genes studied.
Research:
Is research allowed on the sample after clinical testing is complete?
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Not applicable
Not applicable
Sample reports:
Recommended fields not provided:
Clinical validity,
Are family members with defined clinical status recruited to assess significance of VUS without charge?,
Sample negative report
Technical Information
Test Procedure:
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Sanger sequencing
Test Platform:
Other
Availability:
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Tests performed
Entire test performed in-house
Test performance comments
All wet lab work, interpretation and generate report are performed in the location: Biocant Park, Núcleo 4, Lote 4A 3060-197 Cantanhede Portugal
Entire test performed in-house
Test performance comments
All wet lab work, interpretation and generate report are performed in the location: Biocant Park, Núcleo 4, Lote 4A 3060-197 Cantanhede Portugal
Analytical Validity:
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Accuracy 0.99 with a sensitivity of 0.99 and a precision of 0.99.
Proficiency testing (PT):
Is proficiency testing performed for this test?
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Yes
Method used for proficiency testing: Help
Intra-Laboratory
PT Provider: Help
Institute for Standardization and Documentation in the Medical Laboratory, INSTAND
Description of PT method: Help
Exercises are performed annually on at least one gene representative of the panel in question.
Description of internal test validation method: Help
All assays contain internal controls.
Yes
Method used for proficiency testing: Help
Intra-Laboratory
PT Provider: Help
Institute for Standardization and Documentation in the Medical Laboratory, INSTAND
Description of PT method: Help
Exercises are performed annually on at least one gene representative of the panel in question.
Description of internal test validation method: Help
All assays contain internal controls.
VUS:
Laboratory's policy on reporting novel variations
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Not applicable
Not applicable
Recommended fields not provided:
Test Confirmation,
Assay limitations,
Citations to support internal test validation method,
Citations for Analytical validity,
Major CAP category, CAP category, CAP test list
Regulatory Approval
FDA Review:
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Not provided
Additional Information
Reviews:
Clinical resources:
Practice guidelines:
Consumer resources:
IMPORTANT NOTE:
NIH does not independently verify information submitted to GTR; it relies on submitters to provide information that is accurate and not misleading.
NIH makes no endorsements of tests or laboratories listed in GTR. GTR is not a substitute for medical advice.
Patients and consumers
with specific questions about a genetic test should contact a health care provider or a genetics professional.