GTR Test Accession:
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GTR000592393.1
NYS CLEP
CAP
Registered in GTR:
2021-01-25
View version history
GTR000592393.1,
registered in GTR:
2021-01-25
Last annual review date for the lab: 2024-12-29
LinkOut
At a Glance
Test purpose:
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Drug Response;
Therapeutic management
Conditions (4):
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Genes (1):
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CYP2D6 (22q13.2)
Methods (2):
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Molecular Genetics - Deletion/duplication analysis: PCR with electrophoresis; ...
Target population: Help
Patients taking or expecting to take neuropsychiatric medications metabolized by …
Clinical validity:
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Not provided
Clinical utility:
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Not provided
Ordering Information
Offered by:
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Specimen Source:
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- Buccal swab
- Saliva
Who can order: Help
- Health Care Provider
- Licensed Physician
- Nurse Practitioner
- Physician Assistant
Lab contact:
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Contact Policy:
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Laboratory can only accept contact from health care providers. Patients/families are encouraged to discuss genetic testing options with their health care provider.
How to Order:
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Registered clinics may place orders by accessing MyGeneSight.com
Order URL
Order URL
Test service:
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Clinical Testing/Confirmation of Mutations Identified Previously
Custom Deletion/Duplication Testing
Custom Deletion/Duplication Testing
Test additional service:
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Custom mutation-specific/Carrier testing
Test development:
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Test developed by laboratory (no manufacturer test name)
Informed consent required:
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Based on applicable state law
Pre-test genetic counseling required:
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No
Post-test genetic counseling required:
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No
Recommended fields not provided:
Test Order Code,
Test strategy
Conditions
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Total conditions: 4
Condition/Phenotype | Identifier |
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Test Targets
Genes
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Total genes: 1
Gene | Associated Condition | Germline or Somatic | Allele (Lab-provided) | Variant in NCBI |
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Methodology
Total methods: 2
Method Category
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Test method
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Instrument
Deletion/duplication analysis
PCR with electrophoresis
Targeted variant analysis
Allele-specific primer extension (ASPE)
Agena Bioscience MassArray System
Clinical Information
Test purpose:
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Drug Response;
Therapeutic management
Target population:
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Patients taking or expecting to take neuropsychiatric medications metabolized by CYP2D6
Variant Interpretation:
What is the protocol for interpreting a variation as a VUS?
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N/A
N/A
Will the lab re-contact the ordering physician if variant interpretation changes?
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Not provided.
Not provided.
Recommended fields not provided:
Clinical validity,
Clinical utility,
Are family members with defined clinical status recruited to assess significance of VUS without charge?,
Will the lab re-contact the ordering physician if variant interpretation changes?,
Is research allowed on the sample after clinical testing is complete?,
Sample negative report,
Sample positive report
Technical Information
Test Platform:
Other
Availability:
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Tests performed
Entire test performed in-house
Entire test performed in-house
Analytical Validity:
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GeneSight CYP2D6 test has demonstrated accuracy and specificity of 100% with analytical and clinical sensitivity of 2.5 ng/ul for CYP2D6 deletion and duplication analyses, and 2.5 - 20 ng/ul for CYP2D6 mutation analysis.
View citations (1)
- Jablonski MR, King N, Wang Y, Winner JG, Watterson LR, Gunselman S, Dechairo BM. Analytical validation of a psychiatric pharmacogenomic test. Per Med. 2018;15(3):189-197. doi:10.2217/pme-2017-0094. Epub 2018 Feb 07. PMID: 29739269.
Proficiency testing (PT):
Is proficiency testing performed for this test?
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Yes
Method used for proficiency testing: Help
Formal PT program
PT Provider: Help
College of American Pathologists, CAP
Yes
Method used for proficiency testing: Help
Formal PT program
PT Provider: Help
College of American Pathologists, CAP
VUS:
Software used to interpret novel variations
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N/A
Laboratory's policy on reporting novel variations Help
N/A
N/A
Laboratory's policy on reporting novel variations Help
N/A
Recommended fields not provided:
Test Confirmation,
Assay limitations,
Description of internal test validation method,
Description of PT method,
Major CAP category, CAP category, CAP test list
Regulatory Approval
FDA Review:
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Category:
FDA exercises enforcement discretion
NYS CLEP Approval:
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Number:
8550
Status: Approved
Status: Approved
Additional Information
Reviews:
Clinical resources:
Practice guidelines:
Consumer resources:
IMPORTANT NOTE:
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NIH makes no endorsements of tests or laboratories listed in GTR. GTR is not a substitute for medical advice.
Patients and consumers
with specific questions about a genetic test should contact a health care provider or a genetics professional.