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Homo sapiens chemokine (C-X-C motif) ligand 9, mRNA (cDNA clone MGC:110863 IMAGE:30336410), complete cds

GenBank: BC095396.1

FASTA Graphics 

LOCUS       BC095396                2582 bp    mRNA    linear   PRI 17-JUL-2006
DEFINITION  Homo sapiens chemokine (C-X-C motif) ligand 9, mRNA (cDNA clone
            MGC:110863 IMAGE:30336410), complete cds.
ACCESSION   BC095396
VERSION     BC095396.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2582)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2582)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-MAY-2005) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Dr. Stefan Hansson
            cDNA Library Preparation: Michael Brownstein /  Ted Usdin
            Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 198 Row: g Column: 21
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 4505186.
FEATURES             Location/Qualifiers
     source          1..2582
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:110863 IMAGE:30336410"
                     /tissue_type="Placenta, pre-eclamptic"
                     /clone_lib="NIH_MGC_148"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..2582
                     /gene="CXCL9"
                     /gene_synonym="crg-10"
                     /gene_synonym="Humig"
                     /gene_synonym="SCYB9"
                     /db_xref="GeneID:4283"
                     /db_xref="HGNC:HGNC:7098"
                     /db_xref="MIM:601704"
     CDS             61..438
                     /gene="CXCL9"
                     /gene_synonym="crg-10"
                     /gene_synonym="Humig"
                     /gene_synonym="SCYB9"
                     /codon_start=1
                     /product="chemokine (C-X-C motif) ligand 9"
                     /protein_id="AAH95396.1"
                     /db_xref="GeneID:4283"
                     /db_xref="HGNC:HGNC:7098"
                     /db_xref="MIM:601704"
                     /translation="MKKSGVLFLLGIILLVLIGVQGTPVVRKGRCSCISTNQGTIHLQ
                     SLKDLKQFAPSPSCEKIEIIATLKNGVQTCLNPDSADVKELIKKWEKQVSQKKKQKNG
                     KKHQKKKVLKVRKSQRSRQKKTT"
ORIGIN      
        1 aaagaatttc tcaggctcaa aatccaatac aggagtgact tggaactcca ttctatcact
       61 atgaagaaaa gtggtgttct tttcctcttg ggcatcatct tgctggttct gattggagtg
      121 caaggaaccc cagtagtgag aaagggtcgc tgttcctgca tcagcaccaa ccaagggact
      181 atccacctac aatccttgaa agaccttaaa caatttgccc caagcccttc ctgcgagaaa
      241 attgaaatca ttgctacact gaagaatgga gttcaaacat gtctaaaccc agattcagca
      301 gatgtgaagg aactgattaa aaagtgggag aaacaggtca gccaaaagaa aaagcaaaag
      361 aatgggaaaa aacatcaaaa aaagaaagtt ctgaaagttc gaaaatctca acgttctcgt
      421 caaaagaaga ctacataaga gaccacttca ccaataagta ttctgtgtta aaaatgttct
      481 attttaatta taccgctatc attccaaagg aggatggcat ataatacaaa ggcttattaa
      541 tttgactaga aaatttaaaa cattactctg aaattgtaac taaagttaga aagttgattt
      601 taagaatcca aacgttaaga attgttaaag gctatgattg tctttgttct tctaccaccc
      661 accagttgaa tttcatcatg cttaaggcca tgattttagc aatacccatg tctacacaga
      721 tgttcaccca accacatccc actcacaaca gctgcctgga agagcagccc taggcttcca
      781 cgtactgcag cctccagaga gtatctgagg cacatgtcag caagtcctaa gcctgttagc
      841 atgctggtga gccaagcagt ttgaaattga gctggacctc accaagctgc tgtggccatc
      901 aacctctgta tttgaatcag cctacaggcc tcacacacaa tgtgtctgag agattcatgc
      961 tgattgttat tgggtatcac cactggagat caccagtgtg tggctttcag agcctccttt
     1021 ctggctttgg aagccatgtg attccatctt gcccgctcag gctgaccact ttatttcttt
     1081 ttgttcccct ttgcttcatt caagtcagct cttctccatc ctaccacaat gcagtgcctt
     1141 tcttctctcc agtgcacctg tcatatgctc tgatttatct gagtcaactc ctttctcatc
     1201 ttgtccccaa caccccacag aagtgctttc ttctcccaat tcatcctcac tcagtccagc
     1261 ttagttcaag tcctgcctct taaataaacc tttttggaca cacaaattat cttaaaactc
     1321 ctgtttcact tggttcagta ccacatgggt gaacactcaa tggttaacta attcttgggt
     1381 gtttatccta tctctccaac cagattgtca gctccttgag ggcaagagcc acagtatatt
     1441 tccctgtttc ttccacagtg cctaataata ctgtggaact aggttttaat aattttttaa
     1501 ttgatgttgt tatgggcagg atggcaacca gaccattgtc tcagagcagg tgctggctct
     1561 ttcctggcta ctccatgttg gctagcctct ggtaacctct tacttattat cttcaggaca
     1621 ctcactacag ggaccaggga tgatgcaaca tccttgtctt tttatgacag gatgtttgct
     1681 cagcttctcc aacaataaga agcacgtggt aaaacacttg cggatattct ggactgtttt
     1741 taaaaaatat acagtttacc gaaaatcata taatcttaca atgaaaagga ctttatagat
     1801 cagccagtga ccaacctttt cccaaccata caaaaattcc ttttcccgaa ggaaaagggc
     1861 tttctcaata agcctcagct ttctaagatc taacaagata gccaccgaga tccttatcga
     1921 aactcatttt aggcaaatat gagttttatt gtccgtttac ttgtttcaga gtttgtattg
     1981 tgattatcaa ttaccacacc atctcccatg aagaaaggga acggtgaagt actaagcgct
     2041 agaggaagca gccaagtcgg ttagtggaag catgattggt gcccagttag cctctgcagg
     2101 atgtggaaac ctccttccag gggaggttca gtgaattgtg taggagaggt tgtctgtggc
     2161 cagaatttaa acctatactc actttcccaa attgaatcac cgctcacact gctgatgatt
     2221 tagagtgctg tccggtggag atcccacccg aacgtcttat ctaatcatga aactccctag
     2281 ttccttcatg taacttccct gaaaaatcta agtgtttcat aaatttgaga gtctgtgacc
     2341 cacttacctt gcatctcaca ggtagacagt atataactaa caaccaaaga ctacatattg
     2401 tcactgacac acacgttata atcatttatt atatatatac atacatgcat acactctcaa
     2461 agcaaataat ttttcacttc aaaacagtat tgacttgtat accttgtaat ttgaaatatt
     2521 ttctttgtta aaatagaatg gtatcaataa atagaccatt aatcagaaaa aaaaaaaaaa
     2581 aa
//
61..438
/gene="CXCL9"
/gene_synonym="crg-10"
/gene_synonym="Humig"
/gene_synonym="SCYB9"
/codon_start=1
/product="chemokine (C-X-C motif) ligand 9"
/protein_id="AAH95396.1"
/db_xref="GeneID:4283"
/db_xref="HGNC:HGNC:7098"
/db_xref="MIM:601704"
/translation="MKKSGVLFLLGIILLVLIGVQGTPVVRKGRCSCISTNQGTIHLQ
SLKDLKQFAPSPSCEKIEIIATLKNGVQTCLNPDSADVKELIKKWEKQVSQKKKQKNG
KKHQKKKVLKVRKSQRSRQKKTT"
Feature BC095396 : 1 segment
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Supplemental Content

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Reference sequence information

  • RefSeq mRNA
    See reference mRNA sequence for the CXCL9 gene (NM_002416.3).

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