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MAG: hypothetical protein AYK24_08635 [Thermoplasmatales archaeon SG8-52-4]

GenBank: KYK21846.1

Identical Proteins FASTA Graphics 

LOCUS       KYK21846                 333 aa            linear   ENV 22-MAR-2016
DEFINITION  MAG: hypothetical protein AYK24_08635 [Thermoplasmatales archaeon
            SG8-52-4].
ACCESSION   KYK21846
VERSION     KYK21846.1
DBLINK      BioProject: PRJNA270657
            BioSample: SAMN04495913
DBSOURCE    accession LSSF01000052.1
KEYWORDS    ENV; Metagenome Assembled Genome; MAG.
SOURCE      Thermoplasmatales archaeon SG8-52-4 (sediment metagenome)
  ORGANISM  Thermoplasmatales archaeon SG8-52-4
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata;
            Thermoplasmatales.
REFERENCE   1  (residues 1 to 333)
  AUTHORS   Baker,B.J., Lazar,C.S., Teske,A.P. and Dick,G.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2016) Marine Science, University of Texas at
            Austin, 750 Channel View, Port Aransas, TX 78373, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2014
            Assembly Method        :: IDBA v. UD
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 120.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 02/18/2016 17:17:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 3.1
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,162
            CDS (total)                       :: 2,119
            Genes (coding)                    :: 2,036
            CDS (coding)                      :: 2,036
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 38
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 83
            Pseudo Genes (ambiguous residues) :: 0 of 83
            Pseudo Genes (frameshifted)       :: 2 of 83
            Pseudo Genes (incomplete)         :: 79 of 83
            Pseudo Genes (internal stop)      :: 2 of 83
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Thermoplasmatales archaeon SG8-52-4"
                     /isolate="SG8-52-4"
                     /isolation_source="Sulfate-rich zone estuary sediments
                     8-12 cm"
                     /db_xref="taxon:1803819"
                     /environmental_sample
                     /geo_loc_name="USA: White Oak River Estuary North
                     Carolina"
                     /lat_lon="34.7414 N 77.1234 W"
                     /collection_date="Oct-2010"
                     /metagenome_source="sediment metagenome"
                     /note="metagenomic"
     Protein         1..333
                     /product="hypothetical protein"
     Region          2..>201
                     /region_name="UbiA"
                     /note="4-hydroxybenzoate polyprenyltransferase [Coenzyme
                     transport and metabolism]; COG0382"
                     /db_xref="CDD:440151"
     CDS             1..333
                     /locus_tag="AYK24_08635"
                     /coded_by="LSSF01000052.1:2816..3817"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /transl_table=11
ORIGIN      
        1 mklylklirp ygmlfigftp ffgaiangey rllpltilvi igmlahiftf vqndyydtei
       61 dkkskyvsnr plvtdgisik taiviflssf ifsiilnmif lfsiysflml lfsflcmtly
      121 nkyskrffgm eyvlaigvfs ygifgtltvs nsisnlaiii ssigfmhwlf svgvsanlkd
      181 vefdtklgir ttpavfgvya kdkrlvipis fqiyayfiki ihifiatlpf ifgytsilvy
      241 dfpipgicfl lialpllflt qkilytplsk rdnmliyigl qeglalllvp ialisilids
      301 isllltflli lllifwplfw frtlfgkkmi ple
//
1..333
/locus_tag="AYK24_08635"
/coded_by="LSSF01000052.1:2816..3817"
/inference="COORDINATES: ab initio prediction:GeneMarkS+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS+."
/transl_table=11
Feature KYK21846 : 1 segment
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