LOCUS NP_311940 315 aa linear CON 12-FEB-2021
DEFINITION ferrichrome-binding protein [Escherichia coli O157:H7 str. Sakai].
ACCESSION NP_311940
VERSION NP_311940.1
DBLINK BioProject: PRJNA226
BioSample: SAMN01911278
DBSOURCE REFSEQ: accession NC_002695.2
KEYWORDS RefSeq.
SOURCE Escherichia coli O157:H7 str. Sakai
ORGANISM Escherichia coli O157:H7 str. Sakai
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE 1
AUTHORS Hayashi,T., Makino,K., Ohnishi,M., Kurokawa,K., Ishii,K.,
Yokoyama,K., Han,C.G., Ohtsubo,E., Nakayama,K., Murata,T.,
Tanaka,M., Tobe,T., Iida,T., Takami,H., Honda,T., Sasakawa,C.,
Ogasawara,N., Yasunaga,T., Kuhara,S., Shiba,T., Hattori,M. and
Shinagawa,H.
TITLE Complete genome sequence of enterohemorrhagic Escherichia coli
O157:H7 and genomic comparison with a laboratory strain K-12
JOURNAL DNA Res. 8 (1), 11-22 (2001)
PUBMED 11258796
REMARK Erratum:[DNA Res 2001 Apr 27;8(2):96]
REFERENCE 2
AUTHORS Yokoyama,K., Makino,K., Kubota,Y., Watanabe,M., Kimura,S.,
Yutsudo,C.H., Kurokawa,K., Ishii,K., Hattori,M., Tatsuno,I.,
Abe,H., Yoh,M., Iida,T., Ohnishi,M., Hayashi,T., Yasunaga,T.,
Honda,T., Sasakawa,C. and Shinagawa,H.
TITLE Complete nucleotide sequence of the prophage VT1-Sakai carrying the
Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli
O157:H7 strain derived from the Sakai outbreak
JOURNAL Gene 258 (1-2), 127-139 (2000)
PUBMED 11111050
REFERENCE 3
AUTHORS Ohnishi,M., Murata,T., Nakayama,K., Kuhara,S., Hattori,M.,
Kurokawa,K., Yasunaga,T., Yokoyama,K., Makino,K., Shinagawa,H. and
Hayashi,T.
TITLE Comparative analysis of the whole set of rRNA operons between an
enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an
Escherichia coli K-12 strain MG1655
JOURNAL Syst. Appl. Microbiol. 23 (3), 315-324 (2000)
PUBMED 11108008
REFERENCE 4
AUTHORS Makino,K., Yokoyama,K., Kubota,Y., Yutsudo,C.H., Kimura,S.,
Kurokawa,K., Ishii,K., Hattori,M., Tatsuno,I., Abe,H., Iida,T.,
Yamamoto,K., Onishi,M., Hayashi,T., Yasunaga,T., Honda,T.,
Sasakawa,C. and Shinagawa,H.
TITLE Complete nucleotide sequence of the prophage VT2-Sakai carrying the
verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7
derived from the Sakai outbreak
JOURNAL Genes Genet. Syst. 74 (5), 227-239 (1999)
PUBMED 10734605
REFERENCE 5 (residues 1 to 315)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (15-AUG-2018) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 6 (residues 1 to 315)
AUTHORS Ogura,Y., Kurokawa,K., Hayashi,T. and Hattori,M.
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2000) Contact:Yoshitoshi Ogura Kyushu University;
31-1 Maidashi Higashi-ku, Fukuoka, Fukuoka 812-8582, Japan
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to BAB37336.
On May 10, 2018 this sequence version replased gi: 47118301
This update is obtained as follows: the Sakai genome was
resequenced by illumina MiSeq and PacBio RS II sequencers and 78
sites of single base error, 11 sites of insertion (10 one-base
insertions and a 141-base insertion) and 16 sites of deletion (14
one-base deletions, a three-base deletion and a six-base deletion)
were corrected. Annotation was performed using DFAST
auto-annotation system with manual curation.
This work was done in collaboration with Tetsuya Hayashi, Makoto
Ohnishi, Keisuke Nakayama (Miyazaki Medical College), Kozo Makino,
Ken Kurokawa, Katsushi Yokoyama, Masashi Tanaka, Takeshi Honda,
Teruo Yasunaga, Hideo Shinagawa (Osaka University), Takahiro Murata
(Shinshu University), Chang-Gyun Han, Eiichi Ohtsubo, Toru Tobe,
Chihiro Sasakawa (University of Tokyo), Hideto Takami (Japan Marine
Science and Technology Center), Naotake Ogasawara (Nara Institute
of Science and Technology), Satoru Kuhara (Kuyshu University), and
supported by the Research for the Future Program of the Japan
Society for the Promotion of Science.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..315
/organism="Escherichia coli O157:H7 str. Sakai"
/strain="Sakai"
/sub_strain="RIMD 0509952"
/serovar="O157:H7"
/db_xref="taxon:386585"
Protein 1..315
/product="ferrichrome-binding protein"
/calculated_mol_wt=34357
Region 36..302
/region_name="FhuD"
/note="Fe3+-siderophore binding domain FhuD. These
proteins have been shown to function as initial receptors
in ABC transport of Fe3+-siderophores in many eubacterial
species. They belong to the TroA-like superfamily of
helical backbone metal receptor proteins...; cd01146"
/db_xref="CDD:238566"
Site order(78,96..97,118,194)
/site_type="active"
/note="siderophore binding site [active]"
/db_xref="CDD:238566"
CDS 1..315
/gene="fitE"
/locus_tag="ECs_3913"
/coded_by="complement(NC_002695.2:3913354..3914301)"
/transl_table=11
/db_xref="GeneID:916259"
CONTIG join(WP_001301797.1:1..315)
ORIGIN
1 mrlffsllil lsffaratep vqvftddlgr kvtvpahpkr ivslhdldit iplielgvpp
61 vashgrtrpd gshfirsgal ltgvdfdnss iafigtadid ieaivaakpd liiteptrnt
121 pierlekiap tvsidhlkgg apeiyrklae ltgtqsqlai lerryqaqin alkatldsqk
181 itvsviqanq gkinvmhsyh slgrvlrdag frfppliesi peggrmdvsa erlpeldadf
241 vfatwrgdtg gkpqdelaam ekvmpgwcqf ltacrsgryv lisreeaisn sfaslglmaa
301 qiqsqiagrp lpeak
//