LOCUS NP_417298 962 aa linear CON 09-MAR-2022
DEFINITION protease 3 [Escherichia coli str. K-12 substr. MG1655].
ACCESSION NP_417298
VERSION NP_417298.1
DBLINK BioProject: PRJNA57779
BioSample: SAMN02604091
DBSOURCE REFSEQ: accession NC_000913.3
KEYWORDS RefSeq.
SOURCE Escherichia coli str. K-12 substr. MG1655
ORGANISM Escherichia coli str. K-12 substr. MG1655
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE 1 (residues 1 to 962)
AUTHORS Riley,M., Abe,T., Arnaud,M.B., Berlyn,M.K., Blattner,F.R.,
Chaudhuri,R.R., Glasner,J.D., Horiuchi,T., Keseler,I.M., Kosuge,T.,
Mori,H., Perna,N.T., Plunkett,G. III, Rudd,K.E., Serres,M.H.,
Thomas,G.H., Thomson,N.R., Wishart,D. and Wanner,B.L.
TITLE Escherichia coli K-12: a cooperatively developed annotation
snapshot--2005
JOURNAL Nucleic Acids Res. 34 (1), 1-9 (2006)
PUBMED 16397293
REMARK Publication Status: Online-Only
REFERENCE 2 (residues 1 to 962)
AUTHORS Hayashi,K., Morooka,N., Yamamoto,Y., Fujita,K., Isono,K., Choi,S.,
Ohtsubo,E., Baba,T., Wanner,B.L., Mori,H. and Horiuchi,T.
TITLE Highly accurate genome sequences of Escherichia coli K-12 strains
MG1655 and W3110
JOURNAL Mol. Syst. Biol. 2, 2006 (2006)
PUBMED 16738553
REFERENCE 3 (residues 1 to 962)
AUTHORS Blattner,F.R., Plunkett,G. III, Bloch,C.A., Perna,N.T., Burland,V.,
Riley,M., Collado-Vides,J., Glasner,J.D., Rode,C.K., Mayhew,G.F.,
Gregor,J., Davis,N.W., Kirkpatrick,H.A., Goeden,M.A., Rose,D.J.,
Mau,B. and Shao,Y.
TITLE The complete genome sequence of Escherichia coli K-12
JOURNAL Science 277 (5331), 1453-1462 (1997)
PUBMED 9278503
REFERENCE 4 (residues 1 to 962)
AUTHORS Arnaud,M., Berlyn,M.K.B., Blattner,F.R., Galperin,M.Y.,
Glasner,J.D., Horiuchi,T., Kosuge,T., Mori,H., Perna,N.T.,
Plunkett,G. III, Riley,M., Rudd,K.E., Serres,M.H., Thomas,G.H. and
Wanner,B.L.
TITLE Workshop on Annotation of Escherichia coli K-12
JOURNAL Unpublished
REMARK Woods Hole, Mass., on 14-18 November 2003 (sequence corrections)
REFERENCE 5 (residues 1 to 962)
AUTHORS Glasner,J.D., Perna,N.T., Plunkett,G. III, Anderson,B.D.,
Bockhorst,J., Hu,J.C., Riley,M., Rudd,K.E. and Serres,M.H.
TITLE ASAP: Escherichia coli K-12 strain MG1655 version m56
JOURNAL Unpublished
REMARK ASAP download 10 June 2004 (annotation updates)
REFERENCE 6 (residues 1 to 962)
AUTHORS Hayashi,K., Morooka,N., Mori,H. and Horiuchi,T.
TITLE A more accurate sequence comparison between genomes of Escherichia
coli K12 W3110 and MG1655 strains
JOURNAL Unpublished
REMARK GenBank accessions AG613214 to AG613378 (sequence corrections)
REFERENCE 7 (residues 1 to 962)
AUTHORS Perna,N.T.
TITLE Escherichia coli K-12 MG1655 yqiK-rfaE intergenic region, genomic
sequence correction
JOURNAL Unpublished
REMARK GenBank accession AY605712 (sequence corrections)
REFERENCE 8 (residues 1 to 962)
AUTHORS Rudd,K.E.
TITLE A manual approach to accurate translation start site annotation: an
E. coli K-12 case study
JOURNAL Unpublished
REFERENCE 9 (residues 1 to 962)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (08-MAR-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 10 (residues 1 to 962)
AUTHORS Blattner,F.R. and Plunkett,G. III.
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2014) Laboratory of Genetics, University of
Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA
REMARK Protein update by submitter
REFERENCE 11 (residues 1 to 962)
AUTHORS Blattner,F.R. and Plunkett,G. III.
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2013) Laboratory of Genetics, University of
Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA
REMARK Protein update by submitter
REFERENCE 12 (residues 1 to 962)
AUTHORS Blattner,F.R. and Plunkett,G. III.
TITLE Direct Submission
JOURNAL Submitted (26-SEP-2013) Laboratory of Genetics, University of
Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA
REMARK Sequence update by submitter
REFERENCE 13 (residues 1 to 962)
AUTHORS Rudd,K.E.
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2013) Department of Biochemistry and Molecular
Biology, University of Miami Miller School of Medicine, 118 Gautier
Bldg., Miami, FL 33136, USA
REMARK Sequence update by submitter
REFERENCE 14 (residues 1 to 962)
AUTHORS Rudd,K.E.
TITLE Direct Submission
JOURNAL Submitted (24-APR-2007) Department of Biochemistry and Molecular
Biology, University of Miami Miller School of Medicine, 118 Gautier
Bldg., Miami, FL 33136, USA
REMARK Annotation update from ecogene.org as a multi-database
collaboration
REFERENCE 15 (residues 1 to 962)
AUTHORS Plunkett,G. III.
TITLE Direct Submission
JOURNAL Submitted (07-FEB-2006) Laboratory of Genetics, University of
Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA
REMARK Protein updates by submitter
REFERENCE 16 (residues 1 to 962)
AUTHORS Plunkett,G. III.
TITLE Direct Submission
JOURNAL Submitted (10-JUN-2004) Laboratory of Genetics, University of
Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA
REMARK Sequence update by submitter
REFERENCE 17 (residues 1 to 962)
AUTHORS Plunkett,G. III.
TITLE Direct Submission
JOURNAL Submitted (13-OCT-1998) Laboratory of Genetics, University of
Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA
REFERENCE 18 (residues 1 to 962)
AUTHORS Blattner,F.R. and Plunkett,G. III.
TITLE Direct Submission
JOURNAL Submitted (02-SEP-1997) Laboratory of Genetics, University of
Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA
REFERENCE 19 (residues 1 to 962)
AUTHORS Blattner,F.R. and Plunkett,G. III.
TITLE Direct Submission
JOURNAL Submitted (16-JAN-1997) Laboratory of Genetics, University of
Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to AAC75860.
Changes to proteins and annotation made on March 7, 2022. Current
U00096 annotation updates are derived from EcoCyc
https://ecocyc.org/. Suggestions for updates can be sent to
biocyc-support@ai.sri.com. These updates are being generated from a
collaboration that includes EcoCyc, the University of Wisconsin,
UniProtKB/Swiss-Prot, and the National Center for Biotechnology
Information (NCBI).
COMPLETENESS: full length.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..962
/organism="Escherichia coli str. K-12 substr. MG1655"
/strain="K-12"
/sub_strain="MG1655"
/db_xref="taxon:511145"
Protein 1..962
/product="protease 3"
/EC_number="3.4.24.55"
/calculated_mol_wt=107578
Region 1..960
/region_name="PRK15101"
/note="protease3; Provisional"
/db_xref="CDD:185056"
CDS 1..962
/gene="ptrA"
/locus_tag="b2821"
/gene_synonym="ECK2817; ptr"
/coded_by="complement(NC_000913.3:2955996..2958884)"
/transl_table=11
/db_xref="UniProtKB/Swiss-Prot:P05458"
/db_xref="ASAP:ABE-0009252"
/db_xref="ECOCYC:EG10786"
/db_xref="GeneID:947284"
CONTIG join(WP_001138201.1:1..962)
ORIGIN
1 mprstwfkal lllvalwapl sqaetgwqpi qetirksdkd nrqyqairld ngmvvllvsd
61 pqavkslsal vvpvgsledp eayqglahyl ehmslmgskk ypqadslaey lkmhggshna
121 stapyrtafy levendalpg avdrladaia eplldkkyae rernavnael tmartrdgmr
181 maqvsaetin pahpgskfsg gnletlsdkp gnpvqqalkd fhekyysanl mkaviysnkp
241 lpelakmaad tfgrvpnkes kkpeitvpvv tdaqkgiiih yvpalprkvl rvefridnns
301 akfrsktdel itylignrsp gtlsdwlqkq glvegisans dpivngnsgv laisasltdk
361 glanrdqvva aifsylnllr ekgidkqyfd elanvldidf rypsitrdmd yvewladtmi
421 rvpvehtlda vniadrydak avkerlammt pqnariwyis pkephnktay fvdapyqvdk
481 isaqtfadwq kkaadialsl pelnpyipdd fsliksekky dhpelivdes nlrvvyapsr
541 yfasepkadv slilrnpkam dsarnqvmfa lndylaglal dqlsnqasvg gisfstnann
601 glmvnangyt qrlpqlfqal legyfsytat edqleqaksw ynqmmdsaek gkafeqaimp
661 aqmlsqvpyf srderrkilp sitlkevlay rdalksgarp efmvignmte aqattlardv
721 qkqlgadgse wcrnkdvvvd kkqsvifeka gnstdsalaa vfvptgydey tssayssllg
781 qivqpwfynq lrteeqlgya vfafpmsvgr qwgmgfllqs ndkqpsflwe rykaffptae
841 aklramkpde faqiqqavit qmlqapqtlg eeasklskdf drgnmrfdsr dkivaqikll
901 tpqkladffh qavvepqgma ilsqisgsqn gkaeyvhpeg wkvwenvsal qqtmplmsek
961 ne
//