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NCBI Reference Sequence: NZ_LNZX01000005.1
FASTA Graphics
LOCUS NZ_LNZX01000005 115160 bp DNA linear CON 30-APR-2024 DEFINITION Bartonella henselae strain A20 contig_13_2, whole genome shotgun sequence. ACCESSION NZ_LNZX01000005 NZ_LNZX01000000 VERSION NZ_LNZX01000005.1 DBLINK BioProject: PRJNA224116 BioSample: SAMN04286619 Assembly: GCF_001932075.1 KEYWORDS WGS; RefSeq. SOURCE Bartonella henselae ORGANISM Bartonella henselae Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Bartonellaceae; Bartonella. REFERENCE 1 (bases 1 to 115160) AUTHORS Woudstra,C., Fach,P., Chomel,B., Haddad,N. and Boulouis,H.-J. TITLE Direct Submission JOURNAL Submitted (01-DEC-2015) Identypath, Anses UMR BIPAR, rue Pierre et Marie Curie, Maisons-Alfort 94704, France COMMENT REFSEQ INFORMATION: The reference sequence is identical to LNZX01000005.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: De novo CLC NGS v. 7.5.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: GCF_000046705.1 Genome Coverage :: 29.0x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001932075.1-RS_2024_04_30 Annotation Date :: 04/30/2024 01:31:34 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,596 CDSs (total) :: 1,551 Genes (coding) :: 1,456 CDSs (with protein) :: 1,456 Genes (RNA) :: 45 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 38 ncRNAs :: 4 Pseudo Genes (total) :: 95 CDSs (without protein) :: 95 Pseudo Genes (ambiguous residues) :: 0 of 95 Pseudo Genes (frameshifted) :: 68 of 95 Pseudo Genes (incomplete) :: 58 of 95 Pseudo Genes (internal stop) :: 39 of 95 Pseudo Genes (multiple problems) :: 49 of 95 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..115160 /organism="Bartonella henselae" /mol_type="genomic DNA" /submitter_seqid="contig_13_2" /strain="A20" /isolation_source="blood" /host="Felis catus" /db_xref="taxon:38323" /geo_loc_name="France: Paris" /lat_lon="48.51 N 2.20000000 E" /collection_date="1996-04" /collected_by="Nikos Gurfield" gene 645..869 /gene="nrdH" /locus_tag="AT237_RS00935" /old_locus_tag="AT237_04740" CDS 645..869 /gene="nrdH" /locus_tag="AT237_RS00935" /old_locus_tag="AT237_04740" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_004862118.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="glutaredoxin-like protein NrdH" /protein_id="WP_011180143.1" /translation="MPVTIYSKPSCVQCDATRRAFDAKGINYRVVDISRDEQAYSFVQ SLGYRQVPVVVCGENHWSGFRPDMISGLCV" gene 869..1267 /gene="nrdI" /locus_tag="AT237_RS00940" /old_locus_tag="AT237_04745" CDS 869..1267 /gene="nrdI" /locus_tag="AT237_RS00940" /old_locus_tag="AT237_04745" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_005774161.1" /GO_process="GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI" /protein_id="WP_011180144.1" /translation="MGLIVYYSSATGNTEYFVSQLDQRLFKIDKKKPSMLVDEPYVLV VPTYADGEGKMAVPKAVIRFLNEDENRKLIRGVIGGGNRNFGRYYSLASKIIAEKCFV PCLYRFELRGTEEDIICVKKGLERFWKQLV" gene 1249..3399 /gene="nrdE" /locus_tag="AT237_RS00945" /old_locus_tag="AT237_04750" CDS 1249..3399 /gene="nrdE" /locus_tag="AT237_RS00945" /old_locus_tag="AT237_04750" /EC_number="1.17.4.1" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_005866186.1" /GO_function="GO:0005524 - ATP binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]" /GO_process="GO:0006260 - DNA replication [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="class 1b ribonucleoside-diphosphate reductase subunit alpha" /protein_id="WP_011180145.1" /translation="METVGIEQSQKSDQITDYHALNAMLNLYDENGHIQFDMDRLAAR QYFLQHVNQNTVFFHNLKEKIDYLIEEGYYEKALFELYDFSFIKKLFKRAYAFKFRFP TFLGAFKYYTSYTLKTFDGKRYLERYEDRICLVALYLAQGNKALAESFVDEIITGRFQ PATPTFLNAGKKQRGELVSCFLLRVEDNMESIGRSVNSALQLSKRGGGVALCLTNLRE AGAPIKQIENQSSGVLPVMKLLEDSFSYANQLGARQGAGAVYLHAHHLDIMKFLDTKR ENADEKVRIKTLSLGVIIPDITFELARNNEDMYLFSSYDIERVTGKPFSDISLTEHYR SFVDNAKIRKKKISARVFFQTLAEIQFESGYPYILFEDTANRANPIAGRINMSNLCSE ILQVNEASELEADLTYRTVGSDISCNLGSMNIAKAMDSDDFGRTVEAAVRALTAVSDM SNIACVPSIAKGNAESHAIGLGQMNLHGFLAREQIYYGSPEAIDFTNIYFYIVAYHAI RVSNLIARERQKMFVGFEKSAYADGSFFAKYIEQEWKPQFSLVQELFARNNIVIPDQK DWQELKKLVIEYGLYNRNLQAVPPTGSISYINHATSSIHPIASKIEIRKEGKIGRVYY PAPYMDNTNLDFYQDAYEIGPEKIIDTYAAATQHVDQGLSLTLFFPDTATTRDINRAQ IYAWKKGIKSIYYVRLRQVALSGTEVDGCVSCSL" gene 3411..4385 /gene="nrdF" /locus_tag="AT237_RS00950" /old_locus_tag="AT237_04755" CDS 3411..4385 /gene="nrdF" /locus_tag="AT237_RS00950" /old_locus_tag="AT237_04755" /EC_number="1.17.4.1" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_019222180.1" /GO_component="GO:0005971 - ribonucleoside-diphosphate reductase complex [Evidence IEA]" /GO_function="GO:0030145 - manganese ion binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]" /GO_process="GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="class 1b ribonucleoside-diphosphate reductase subunit beta" /protein_id="WP_011180146.1" /translation="MTKITTKNPVVCAVNWNRLHDEKDLEVWNRLTGNFWLPEKVPLS NDIPSWASLTEEERKLTIRVFTGLTLLDTIQNTVGAISLMADAITEHEEAVLTNIAFM EAVHARSYSSIFSTLCSTVEVDDAFRWSEENIHLQKKARLVLERYEGNDPLKKKIAST LLESFLFYSGFYLPMYWASRAKLTNTADLIRLIIRDEAVHGYYIGYKFQLGFAKLDET KKKEVKDFAFNLLFDLYNIECKYTEDLYDALGLTEDVKIFLHYNANKALMNLGFEALF PSEVCRVNPAILAALSPNSDENHDFFSGAGSSYVIGKAVATTDDDWEF" gene complement(4382..5248) /gene="prmC" /locus_tag="AT237_RS00955" /old_locus_tag="AT237_04760" CDS complement(4382..5248) /gene="prmC" /locus_tag="AT237_RS00955" /old_locus_tag="AT237_04760" /EC_number="2.1.1.297" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_006926265.1" /GO_function="GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]" /GO_process="GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="peptide chain release factor N(5)-glutamine methyltransferase" /protein_id="WP_011180147.1" /translation="MNKHSLNNVIRQTQEKLRSQGVSEANLDAKILVEWITDTNISDR VLQPDLCLSFEQILQLEKAIQRRIAGEPVYRIIGKREFYGISFALSQETLEPRSDTET LVDLVLPPLKKYGEKSEKITLLDMGTGSGAIAIAILKQIPQSYAVAVDISENALKTAT KNAKSAKVINRFTPLLSDWFDSVTGQFDLIISNPPYIPETDITKLAKEVHLHDPLRAL IGGKDGLDFYRKLSDKAANYLKEKGSIAVEIGYSQEKEVCDLFEKNGFKCLEMRKDLN GIPRALLFVCNP" gene complement(5245..6324) /gene="prfA" /locus_tag="AT237_RS00960" /old_locus_tag="AT237_04765" CDS complement(5245..6324) /gene="prfA" /locus_tag="AT237_RS00960" /old_locus_tag="AT237_04765" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_004862106.1" /GO_function="GO:0016149 - translation release factor activity, codon specific [Evidence IEA]" /GO_process="GO:0006415 - translational termination [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="peptide chain release factor 1" /protein_id="WP_011180148.1" /translation="MVSLPQDRMRQLEKRFEIIESQMAKNPNAEIYVKLASEYAELQP IVSSIRALNALYGEITDLETIISDKLTDVEMRTLAQEELPLLCQKMEQLEQKLQILLL PKDVADEKSAIVEIRAGTGGSEAALFAGDLFRMYERYAASRNWKVEVVSLNEGEVGGY KEIIATISGRGVFSKLKFESGVHRVQRIPETETGGRIHTSAATVAVLPEAEEIDIEIR PEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMVVQAEKSQHQNRARALQILRAR LFDIERQKAENERSASRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVLEG DLDELIHALISDHQTALLMEMDHHE" gene complement(6519..7014) /locus_tag="AT237_RS00965" /old_locus_tag="AT237_04770" /pseudo CDS complement(6519..7014) /locus_tag="AT237_RS00965" /old_locus_tag="AT237_04770" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_007551871.1" /GO_function="GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]" /GO_process="GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]" /note="frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology." /pseudo /codon_start=1 /transl_table=11 /product="Fur family transcriptional regulator" gene complement(6953..9670) /gene="secA" /locus_tag="AT237_RS00970" /old_locus_tag="AT237_04775" CDS complement(6953..9670) /gene="secA" /locus_tag="AT237_RS00970" /old_locus_tag="AT237_04775" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_012754613.1" /GO_function="GO:0005524 - ATP binding [Evidence IEA]" /GO_process="GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="preprotein translocase subunit SecA" /protein_id="WP_011180150.1" /translation="MVGLGVFARKFFGSAHERRLKVLRKKAEQINVLEEQFQKLSDTQ LCKKTDEFRKRLVEGETVDLLLPEAFATVREAAKRVYDMRPFDVQLIGGMVLHDCGIA EMRTGEGKTLMATLPIYLNALEGKGVHVVTVNDYLANRDAETMGKIFGFLGLTTGVIL HDLDSDARRAAYACDITYATNNELGFDYLRDNMAFDRSQMVQRGHHYAIVDEVDSILI DEARTPLIISGPLEDRTDFYNLIDTFIPALTPEDYEIDEKQKTTTFTEVGTEKIEKML EQAGHLKGESLYDIENVAIVHHINNALKAHKLFVRDKDYIVRNGEIVIIDEFTGRMMP GRRYSEGLHQALEAKEHVAIQPENQTLASITFQNYFRMYRKLSGMTGTAITEAEEFSN IYGLDVIEVPTNLPIQRRDEDDEIYRTAEEKYRAIVRDIRQAHEKRQPILVGTTSIEK SEQLAERLRKEGITNFRVLNARYHEQEAYIIAQAGVPGAVTIATNMAGRGTDIQLGGN IEMRIRQELQDMPEGLERTAKIEEIKKDVKQLKEKALAAGGLYVIATERHESRRIDNQ LRGRSGRQGDPGRSKFFLSLQDDLMRIFGSNRMDGMLQKLGLKENEAIIHPWINKAIE KAQKKVEARNFEIRKNLLKYDDVMNDQRKVIFEQRMEIMNAEDLTEMILEMRNEVVED LVETYIPSGTYCEKWDITALQEELHQLFNLELPIETWAKEDGIAEEQILERISNAVTK LENERIERFSPEVMAYFHKAVLLETIDTLWREHLVHLDHLRSVVGFRGYAQRDPLNEY KTESFELFQAMLRNLRRIVTSKLMRFEIIQQPIEPRIPEQTDVGDPILNDQNKKNSST LWTPSQENKFVNPKDRNPSDSTTWGKVGRNERCPCGSEKKYKHCHGAFV" gene 10085..11038 /locus_tag="AT237_RS00975" /old_locus_tag="AT237_04780" CDS 10085..11038 /locus_tag="AT237_RS00975" /old_locus_tag="AT237_04780" /EC_number="5.2.1.8" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_007347670.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="peptidylprolyl isomerase" /protein_id="WP_011180151.1" /translation="MKFNFITLFLTSTLLASTNLGVMAQEGVKSVSNDLKTLEKASEK TVAPSHVMAVIDGKEVTAGQLDELALEINPGLARFSDEQRRITVLKAYLDMLALAKAA IKEGIDKSETYNKRMAVMRDNVLQQLYFKQTVVDQISDADLETLYKKEVAALPKEDEV KARHILVKTKKEAEAIIKRLNKGESFEEIAKKNSTDGSAAVGGDLGYFSHGQMVKPFE DAAFGLKVGEYTKKPVESPFGWHIIKIEDRRVKQPPVFDDVKEMLRTQLIKERYQKLI ADLRKKIDVKYPDPNVTKLMQSLNQNEAPLSDETSDEEEAE" gene 11153..12385 /gene="argJ" /locus_tag="AT237_RS00980" /old_locus_tag="AT237_04785" CDS 11153..12385 /gene="argJ" /locus_tag="AT237_RS00980" /old_locus_tag="AT237_04785" /EC_number="2.3.1.1" /EC_number="2.3.1.35" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_012754615.1" /GO_function="GO:0004358 - glutamate N-acetyltransferase activity [Evidence IEA]" /GO_process="GO:0006526 - arginine biosynthetic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ" /protein_id="WP_011180152.1" /translation="MALEISRLFPQNIQELPSLSGVRIATAEAGIKYKDRTDLLFIVF DKSASVAGVFTRSKCPSAPVEHCRISLPHGVARGVVVNSGNANAFTGRKGKQTVDTII CAAANALKVKKNEIFIASTGVIGEPMEASSIVNLLPSMAKTAKEGNWLEAAKAIMTTD TFPKLATRRFDCGGETITINGIAKGAGMIAPDMATMLSFVVSDAAISSQMLQSMLSEA VQESFNSITVDSDTSTSDTLMMFATGKESFPCITSKTDPRYEVFSKQLRALLHELALQ VVCDGEGARHLIEVHVIGATTDNTAKIIALSIANSPLVKTAIAGEDANWGRVVMAVGK AGVEVDRDLLTIWFGEHRLAINGERDPEYCEEKIGAYMQNKHITIRVDIGLGTGKATV WSCDLTKEYVMINGDYRS" gene 12520..12933 /gene="mutT" /locus_tag="AT237_RS00985" /old_locus_tag="AT237_04790" CDS 12520..12933 /gene="mutT" /locus_tag="AT237_RS00985" /old_locus_tag="AT237_04790" /EC_number="3.6.1.55" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_006926259.1" /GO_function="GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]" /GO_process="GO:0006281 - DNA repair [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="8-oxo-dGTP diphosphatase MutT" /protein_id="WP_034447528.1" /translation="MPIKSSLLIVVACALLDQDNRVLLTQRPEGKSLAGLWEFPGGKV EQGETPEASLIRELEEELGVQVQADNLFPLTFASHGYETFHLLMPLYFCSHYKGVAQG REGQNLKWIFINDLDKYPMPEADKPLVQVLKNFFI" gene complement(14141..15004) /locus_tag="AT237_RS00990" /old_locus_tag="AT237_04795" CDS complement(14141..15004) /locus_tag="AT237_RS00990" /old_locus_tag="AT237_04795" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_011179009.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="NlpC/P60 family protein" /protein_id="WP_034447525.1" /translation="MLSKDPRLYAFRDDLADKRFETEITAQRFIQGEKKRVNTAVAGL FKENNKKSEKQTECLLGEELLIFEQGKTMSWGQSLKDGYVGYIDTTILCTSAIKQTHI VSVPRTFQYLQADLRGPMEYPLSMGSKVSVVNETEVRGTIYAILESGKAIITRHLSPI GRVYEDYVTVAETLIHTPYLWGGVSGFGIDCSGLVQLSMMMTGKMVLRDTDMQQKTIG RVLTDSDKLKRGDLVFWNGHVAIMIDHENIIHANGYSMDVMIEPLEEAVTRIAKKYQY PIEKRRPIQEM" gene complement(15146..16513) /locus_tag="AT237_RS00995" /old_locus_tag="AT237_04800" CDS complement(15146..16513) /locus_tag="AT237_RS00995" /old_locus_tag="AT237_04800" /EC_number="3.4.11.-" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_004858614.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="leucyl aminopeptidase family protein" /protein_id="WP_034447523.1" /translation="MHLHHIHFTSTRIDNSCPIFLVNQRSLADLSLDASTTAWIKVND FTGKAGQVLFIPHETGHLKKVLFGLGNGDEPFITGLLAKNLPAGNWHLEGTASHEINN YLGLAFGSYQFNRYRQNSSSKSLSFYVNDTVDLNELKRIYETVFFVRDLINIPANDMN PDILEKETRHLGKTYGADVQSICGDELLTHNFPMIHAVGRASNTAPRLIELHWGQENH PKITLVGKGVTFDTGGLDIKSANNMLLMKKDMGGGAHVLGLAKLIMDAKLPFRLRVLI PAVENAISANAYRPGDILKSRKGLSVEIGNTDAEGRLVLADALAYGDEESPQFMLCMA TLTGAAHIALGPELPAFYCNDSVWAQQISQSAHSVYDPLWQMPLWKPYEEMLSSPIAD LNNITGNNFAGSIVAALFLNSFVEKTKHFAHFDLYGWVPKEKPGFPVGGSAQAIRALY NLFKN" gene complement(16533..17477) /gene="coaA" /locus_tag="AT237_RS01000" /old_locus_tag="AT237_04805" CDS complement(16533..17477) /gene="coaA" /locus_tag="AT237_RS01000" /old_locus_tag="AT237_04805" /EC_number="2.7.1.33" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_005768003.1" /GO_function="GO:0004594 - pantothenate kinase activity [Evidence IEA]" /GO_process="GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="type I pantothenate kinase" /protein_id="WP_223396458.1" /translation="MSDRYSPYRVFTAQEWSQFRADTPLTLTFDEIKRLRSIDDPIDL EEVQRIYLSLSRLLSCHVEAVQELFHKRQQFLYQEGTRKTPFIIGIAGSVAVGKSTTA RILQELLKRWTSSLKVDLITTDGFLYPNAVLQQKNRMNRKGFPDSYDIKKLLCFLSAI KAGIGNVRAPLYSHMIYDVLENQTVTIDRPDILIVEGINVLQVNDLPKDGKIIPFVSD FFDFSIYVDAETEVIRHWYLERFKRLRKTAFQNPKSYFHRYALMHEEESLKIAENIWQ TINLKNLQENILPTRPRSNLILRKGKKHLVEYVALRRL" gene complement(17647..18636) /locus_tag="AT237_RS01005" /old_locus_tag="AT237_04810" CDS complement(17647..18636) /locus_tag="AT237_RS01005" /old_locus_tag="AT237_04810" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_011180157.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="asparaginase" /protein_id="WP_011180157.1" /translation="MKKIAIGTLGGTIAMAADNLGQMQPILTSDILIKSVPDLDSVAD IHAQTLIQIPSGSLSFKSLFEIIEWATQQIKAGAEGIVLTQGTDTVEETAFFLSLYWN KAEPLIVTGAMRLPHEAGADGPANILAATRVAAHPQSRNRGVLVVINDTIHSPYWVQK SHTIKIETFQSSPVGVLGIILEGKLIYFTDRNFFPTTFDLPKNYDHQVAILYSSLSSD TQLMKFCFESGHYAGVVIAGFGSGHCSFEEADIVRQYTQKMPIIIASRTYTGPTTRKT YGYKGSEVDMIASGALMSGYLSALKARLLLWAFLAQGLSLEQINAHWDDWTIS" gene 18840..19421 /gene="hslV" /locus_tag="AT237_RS01010" /old_locus_tag="AT237_04815" CDS 18840..19421 /gene="hslV" /locus_tag="AT237_RS01010" /old_locus_tag="AT237_04815" /EC_number="3.4.25.2" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_007551861.1" /GO_function="GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]" /GO_process="GO:0051603 - proteolysis involved in protein catabolic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="ATP-dependent protease subunit HslV" /protein_id="WP_011180158.1" /translation="MAEHKPDIMYGTTIITVRKGGKVVMAGDGQVSLGQTIMKGNARK VRRLGKSGAVIAGFAGATADAFTLLERLETKLEQYPDQLMRACVELAKDWRTDRYLRR LEAMMLVADKKITLALTGLGDVLEPEDGIMAIGSGGNFALSAARALIDMDLDAETIAR KAMNIAAKICVYTNDHFTIETLDAELSSLEKAI" gene 19422..20732 /gene="hslU" /locus_tag="AT237_RS01015" /old_locus_tag="AT237_04820" CDS 19422..20732 /gene="hslU" /locus_tag="AT237_RS01015" /old_locus_tag="AT237_04820" /EC_number="3.4.25.2" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_012230626.1" /GO_function="GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="ATP-dependent protease ATPase subunit HslU" /protein_id="WP_011180159.1" /translation="MCVVFSPRETVSELDRFIIGQSDAKRSVAIALRNRWRRQQLDGP MRDEVMPKNILMIGPTGVGKTGIARRLAKLAGAPFVKVEATKFTEVGYVGRDVEQIIR DLVEIAISLVREKKRDEVKVKAHINAEERVLDALVGKTASPATRESFRKKLRDGELDE KEIEIEVSDNNSNSTSTFDIPGMPGAQMGIMNLSEIFGKMGNRTKVRKTTVKDAFKPL IDDESEKLLDQDQIIQEALRVAENDGIVFIDEIDKIATRDGGASAAVSREGVQRDLLP LVEGTTIATKYGQIKTDHILFIASGAFHVSKPSDLLPELQGRLPIRVELNPLTREDLR RILTEPEASLIKQYIALMATEEVHLEITDDAIDALADIAVDLNARIENIGARRLQTVM ERVLDEISFTAPDKAGTSFKVDAAYVKKSIGDLAADVDLSRFIL" gene complement(20752..21750) /locus_tag="AT237_RS01020" /old_locus_tag="AT237_04825" CDS complement(20752..21750) /locus_tag="AT237_RS01020" /old_locus_tag="AT237_04825" /EC_number="2.1.1.-" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_004865107.1" /GO_function="GO:0052916 - 23S rRNA (guanine(1835)-N(2))-methyltransferase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="class I SAM-dependent methyltransferase" /protein_id="WP_034447520.1" /translation="MLLFLPFEKYALPYPDPSQSWLSFGLTEIPVPEWTKNLEIITPW RPDFLKFANAQFRCSPEINQTCTHDGALLQLSKYRGFNQNCFLDLLERVKPGGWIIIG GNKTSGADSMMKWVKKIVPITNKFSKNHGLVFWIQVPQQIEKQNTAQLRSPPLTFENK FQTTSGMFSHGRIDPGSAVLASHMCKTISGKTADFGAGWGFLSHAALERSEKLTALDL YEADYNALKAAKQHLKHITTSLPIHFYWHDLVHEPITNLYDTIISNPPFHTQQTTDVS LGQHFIINAAKYLKPGGNLLLVANRHLPYETLLKRLFRTVLIYEKAHGFKVIEAYR" gene complement(21822..24023) /gene="pnp" /locus_tag="AT237_RS01025" /old_locus_tag="AT237_04830" CDS complement(21822..24023) /gene="pnp" /locus_tag="AT237_RS01025" /old_locus_tag="AT237_04830" /EC_number="2.7.7.8" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_007551857.1" /GO_function="GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]" /GO_process="GO:0006402 - mRNA catabolic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="polyribonucleotide nucleotidyltransferase" /protein_id="WP_011180161.1" /translation="MFKTHKIEIEWAGRPLTLETGKIARQADGAVIATYGETIVLATV VSAKSPKPDQDFFPLTVNYQEKSYAVGRIPGGYLKRESRPSENETLISRLIDRPIRPL FADGYKNDTQVIVSVIQHDLENNPDILAMIASSAALTLSGVPFMGPIAGARVGYCNGQ YILNPHIDEMSESKLDLVVAGTENAVLMVESEAQELPEDIMLGAVMFGHKGLQPILDA IIKLAEVAAKDPRDFVPEDLSDLETAMLEMAEKDIRKAYTITDKQERYAALDALKTEI INKFMPETEEDCKFSVDQIATVFKQLQAKIVRSNILDTKKRIDGRDLSTVRPIQSEVG ILPRTHGSALFTRGETQAIVVATLGTGEDEQYIDSLTGMYKETFLLHYNFPPFSVGET GRLGSPGRREIGHGKLAWRAIHPMLPSKESFPYTIRAVSEITESNGSSSMATVCGTSL ALMDAGVPLARPVAGIAMGLIKEGERFAVLSDILGDEDHLGDMDFKVAGTANGITALQ MDIKIDGITEEIMKIALEQAKGGRIHILNEMAKALTSARAELSEFSPRIEVMNIAVDK IRDVIGTGGKVIREIVEQTGAKINIEDDGTIRIASADAKTIEAAKRWIHSIVDEPEVG VIYQGTVVKTAEFGAFVNFFGSRDGLVHISQLTTERVTKTTDVVKEGDKVWVKLMGFD ERGKVRLSMKIVDQKTGKEIIGEDSIKAEQEKYTEETHKSENKRRRKKKEE" gene complement(24287..24556) /gene="rpsO" /locus_tag="AT237_RS01030" /old_locus_tag="AT237_04835" CDS complement(24287..24556) /gene="rpsO" /locus_tag="AT237_RS01030" /old_locus_tag="AT237_04835" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_006473093.1" /GO_component="GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]" /GO_function="GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="30S ribosomal protein S15" /protein_id="WP_011180162.1" /translation="MSITAERKKAIVAEYANKVGDTGSPEVQVAVLSERIANLTNHFK FHKKDNHSRRGLLKMVSQRRRLLDYLKGIDQNRYQTLIKKLGLRR" gene 24879..26507 /locus_tag="AT237_RS01035" /old_locus_tag="AT237_04840" CDS 24879..26507 /locus_tag="AT237_RS01035" /old_locus_tag="AT237_04840" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_004858634.1" /GO_function="GO:0022857 - transmembrane transporter activity [Evidence IEA]" /GO_process="GO:0055085 - transmembrane transport [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="MFS transporter" /protein_id="WP_011180163.1" /translation="MQSISTFKLFRNSVFRNLWSSTLISNLGGLIQAVGAGWLMALIS SSHSMVGLVQSATTLPLVMFSLMAGALADNFNRRQIMLYAQIMMMIISMILAILSSMS FLTPWLLLCFTFLIGCGTAFYNPSWQATIGDIVSRENIPAAVSLNSVGFNLMRSVGPA IGGAIIATLGVAAAFLFNAISYIPLIGTLFFWKPIYENNTLPRERLFGAVSDGLRYVA MSPNLLSIMVRAFLFGIGAISILALLPIVVHKILGGSAFLYGTLLGCFGLGAMTAGII NASVRNYFRLETIIASAFIGFSFSCFFLAMSRSLIISHIALFPAGLCWVLALSLFNTS VQLSTPRWVVARVLALYQTASYGGMAIGSMIWGVLADGYSPTIALSICSLFLIFGALA GIKFRIQEIPRIDLDPLDHFREPELLLDLKARSGPIMIMIDYQIHEDDLEEFLKVMTR RRHIRLRDGARQWVLLRDLERPQYWREAYHMPTWVDYLRHNHRRIKADAEVNKLLRRL NRAPDGIRVHRMIERQTIPNVSEMHLKSSADQLP" gene complement(26976..27935) /gene="truB" /locus_tag="AT237_RS01040" /old_locus_tag="AT237_04845" CDS complement(26976..27935) /gene="truB" /locus_tag="AT237_RS01040" /old_locus_tag="AT237_04845" /EC_number="5.4.99.25" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_012230630.1" /GO_function="GO:0004730 - pseudouridylate synthase activity [Evidence IEA]" /GO_process="GO:0006400 - tRNA modification [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="tRNA pseudouridine(55) synthase TruB" /protein_id="WP_011180164.1" /translation="MARQSKKKGRPVSGWIILDKPKGMRSTEAVSQIKYLFHAQKVGH AGTLDPLASGLLPIALGEATKTVPYVMQGTKTYRFHIAWGEERSTDDLEGEITHTSSK RPTREEILALLPQYTGVILQTPPQFSAIKIAGNRAYDLAREGEVVEIPPRQVEIETFK LIEMITKDHSIFEITCGKGTYVRSLARDMGRDLGCYAHIADLRRIAVAPFCENDLITW DELKAVELDKSAKNEKDAPFERNFIKLDELLIETISALECLSHYTLSQTQAQQVMKGN TVLLYHHDVPLDEDEVCVLYQDQLLAIGALEKNQFKPKRLFTI" gene complement(27940..28347) /gene="rbfA" /locus_tag="AT237_RS01045" /old_locus_tag="AT237_04850" CDS complement(27940..28347) /gene="rbfA" /locus_tag="AT237_RS01045" /old_locus_tag="AT237_04850" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_012230631.1" /GO_process="GO:0006364 - rRNA processing [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="30S ribosome-binding factor RbfA" /protein_id="WP_011180165.1" /translation="MKNAEPSQRQLRVGEQVRHAVAHILQQGILLDNLLKNMVISVVE VRMSPDLKIAICFVSPLSTVHNASRADVVNALNKHSRFIRGEISHSLRQMKYMPELRF RLDNSFDNFSKIDALLRSPEVARDLHHNDKVGD" gene complement(28476..31013) /gene="infB" /locus_tag="AT237_RS01050" /old_locus_tag="AT237_04855" CDS complement(28476..31013) /gene="infB" /locus_tag="AT237_RS01050" /old_locus_tag="AT237_04855" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_017196219.1" /GO_component="GO:0005737 - cytoplasm [Evidence IEA]" /GO_function="GO:0003743 - translation initiation factor activity [Evidence IEA]" /GO_process="GO:0006413 - translational initiation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="translation initiation factor IF-2" /protein_id="WP_034447518.1" /translation="MSENNNDKITVKRTLTLKRSVLETSTVKQNFSHGRTKAVVVETK RRKITRTDEKAETPQPITKPHVAPQRSRPRFEDAKPNEPTAKSNLSSAEIEARLRALE EAHIQERIIREQAEEEARRAKEREESLRQTIQKTEIDETPQEEEEPTLQTQTPSLSPA QSQIEPINIPITPKNTTVIEKRKADETKEDDRNSRRTNLAKSEVRAPKVLKGADEKRR GKITLNSALDEEGSARGRSMAAMRRRQEKFKRAQNQEPKEKISREVILPETITIQELA QRMTERSVDVIKFLMKQGQMMKPGDVIDADVAELIAVEFGHTVKRVLESDVEEGIFNI ADNPQKMQLRPPVVTIMGHVDHGKTSLLDAIRKANVVSGEAGGITQHIGAYQVEKNGQ KITFIDTPGHAAFTAMRARGARVTDIAVLVVAADDSVMPQTIESINHAKAAGVPIIVA INKIDKPTANAQKVRTELLHHEVFVETMGGETLEVEVSAKTGQNLDKLLEAILLQAEI LDLKADPQRTAEGVVIEAKLDRGRGSVATVLVQKGTLHPSDIIVAGNEWGRVRALIDD HGRHVKEAVPSTPIEILGMQGTPQAGDRFAVVTHEAKAREIAEYRQRLARDKAVARQT GSRGSLEQMMSKLQTTGVKEFPLIIKGDVQGSIEAIASALEKLGNEEVRARIVHSAAG GITESDISLAEASHSAVIGFNVRANKQARDCAKTQGIEIRYYNIIYDLVDDIKAAMSG LLSPEQRETFLGNAEILEVFNITKIGKVAGCLVTEGKIERGAGVRLIRDNIVIHEGKL KTLKRFKDEVNEVQSGQECGIAFENYEDIRTGDIIETFHIEHINRTL" gene complement(31010..31645) /locus_tag="AT237_RS01055" /old_locus_tag="AT237_04860" CDS complement(31010..31645) /locus_tag="AT237_RS01055" /old_locus_tag="AT237_04860" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_012230633.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="RNA-binding protein" /protein_id="WP_011180167.1" /translation="MNERTCIVTRKNASAKALIRFVIGPNNQIVPDLKSNLPGRGVWV SSRRSAIEEAIRKKAFNKSFKTDVEVASNLAHIVDTLLLKAALGSLSIARKAGAVVMG ATKVDAAIRSGQVIFVLHAREATENGKQKISQAIHTIQQKTNQDIKTTSLFTSYEMRV AFGANPVMHAALLNMKAAEGFLKTINKLIAYRDDKHSKPGEMTAQAVKEIQ" gene complement(31672..33258) /gene="nusA" /locus_tag="AT237_RS01060" /old_locus_tag="AT237_04865" CDS complement(31672..33258) /gene="nusA" /locus_tag="AT237_RS01060" /old_locus_tag="AT237_04865" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_019222208.1" /GO_process="GO:0006353 - DNA-templated transcription termination [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="transcription termination factor NusA" /protein_id="WP_011180168.1" /translation="MATSANRLEILQIADAVAREKSIDREIVISAMADAIQKAARSRY GQETNIRAEINSKTGEIKLQRLLKIVDIIEDYTSEITLSDALKRQADAKVGDFFADLL PPMDFGRIAAQSAKQVIVQKVRDAEREQQYEEFKNKIGEIISGTVKRVEYGNVIVDLG RGEAIVRRDELIPRESFRYGDRIRAFVHDVHREPRGPQIFLSRTHPQFMVKLFTMEVP EIYDGIIEIKSVARDPGSRAKIAVVSRDGSIDPVGACVGMRGSRVQAVVAELQGEKID IIPWSPDAATFIVNALQPAEVSKVVLDEDAERIEVIVPDDQLSLAIGRRGQNVRLASQ LTGWNIDILTEQEESENRQKEFTERSKLFMESLDVDEMIGQVMASEGFSSIEEIAYID LEEIASIDGFDHETAAEIQNRAQEYLERKEKELDEKRKKLGVCDELRMLPGMTSAMLV AIGEDGVKTMEDFAGYAVDDLAGWRERKEGQTQNFSGILTPFDITRADAEAMVLAARV QAGWINQADLVTENSAENEK" gene complement(33308..33958) /gene="rimP" /locus_tag="AT237_RS01065" /old_locus_tag="AT237_04870" CDS complement(33308..33958) /gene="rimP" /locus_tag="AT237_RS01065" /old_locus_tag="AT237_04870" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_011180169.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="ribosome maturation factor RimP" /protein_id="WP_011180169.1" /translation="MKLTWIKCMSKTERISDIDEPRLFEENGVEAHIAAFVMPLLKPL GFRLVRVKLLGLNGLTLQIMVERPDGSMTVEDCETVSRTVSPLLDVQNVIERKYHLEI SSPGIDRPLVRKSDFFHWQGHIAKIETKIILEGRRKFRGTLTNITQDGFTLNTDKAAY GESMYISIPFDDIIDAHLVLTDELIRDALKKNKDLSQQFISEDNQKLSKQERNYKN" gene complement(34087..34788) /locus_tag="AT237_RS01070" /old_locus_tag="AT237_04875" CDS complement(34087..34788) /locus_tag="AT237_RS01070" /old_locus_tag="AT237_04875" /EC_number="2.1.1.33" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_011179025.1" /GO_function="GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008176 - tRNA (guanine(46)-N7)-methyltransferase activity [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="tRNA (guanine(46)-N(7))-methyltransferase TrmB" /protein_id="WP_011180170.1" /translation="MIDHNIRTGKAFFGRRKGKRLRNSQLVLIKKLFPTLDINLNNSV PLNLTSLFSRKVKEVRLEIGFGGGEHLLHEMKHFPQTGFIGIEPFINGMAKMLMSLEE HKQYQNQLRLYNDDATGLLDWLPNASLDGIDLFYPDPWPKKKHWKRRFINMKNLNRFA RVLKTGKKFRFASDIESYVNWTLYHCSNHHSFEWEAKNPKDWKTPYTLWSGTRYEAKA LREGRAPTYLTFIKK" gene complement(34785..36053) /gene="metK" /locus_tag="AT237_RS01075" /old_locus_tag="AT237_04880" CDS complement(34785..36053) /gene="metK" /locus_tag="AT237_RS01075" /old_locus_tag="AT237_04880" /EC_number="2.5.1.6" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_006926247.1" /GO_function="GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]" /GO_process="GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="methionine adenosyltransferase" /protein_id="WP_011180171.1" /translation="MSHQDYLFTSESVSEGHPDKICDRISDEIVDMIYKEAQKTGTDP WLVRIACETLVSINRVVIAGEVRVPDTLLKRDKNREFIYDETGLPRINPARFRAVARR AIRAIGYEQVGFHWKTVKIDVLLRPQSVDIARGVDNARDRHDEEGAGDQGIMFGYACR ETPDLMPAPIYYAHKILKLLAEARHKGEGETGKLGPDAKSQITIRYKNGKPIEVTSIV LSTQHLDESWDSHKVRTVVEPYIHQALHDIPISDQCSWYINPTGKFVIGGPQCDAGLT GRKIIVDTYGGAAPHGGGAFSGKDTTKVDRSAAYAARYLAKNIVAADLAERCTIQLSY AIGVAQPLSIYINFHGTGKVDESIIEAVIRKIMDLSPTGIRKHLDLNKPIYTKTAAYG HFGRKPKRDGSFSWEKTDLIKTLQKMIKVP" gene complement(36174..36590) /locus_tag="AT237_RS01080" /old_locus_tag="AT237_04885" CDS complement(36174..36590) /locus_tag="AT237_RS01080" /old_locus_tag="AT237_04885" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_011179027.1" /GO_function="GO:0003677 - DNA binding [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="helix-turn-helix domain-containing protein" /protein_id="WP_011180172.1" /translation="MTETRKKPDPIDVYVGTRIRLRRNILGLTQEKLGEKLGITFQQI QKYEKGTNRIGASRLQAIAEIMDVPVSYFFDKGVGTQQVEGFAESDNDFMDFCSSSEG IQLMRAFTNISDSKVRRKIIDLAKALSEEEDLTNKL" gene complement(36739..38373) /gene="lnt" /locus_tag="AT237_RS01085" /old_locus_tag="AT237_04890" CDS complement(36739..38373) /gene="lnt" /locus_tag="AT237_RS01085" /old_locus_tag="AT237_04890" /EC_number="2.3.1.269" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_010704697.1" /GO_component="GO:0016020 - membrane [Evidence IEA]" /GO_function="GO:0016410 - N-acyltransferase activity [Evidence IEA]" /GO_process="GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="apolipoprotein N-acyltransferase" /protein_id="WP_011180173.1" /translation="MKVLNKMSSPKSNFVFLNSVKMSLFSLTGWKRQGVLFLCGALTS FALPPFYLTPLCFLTFPVFIVLLDKISALQNNRKCLLIYALSCGTFGFGYFIFGFWWL CNALLTDPITFGWAVPFAIFCPPLYLSLYWFFAGFIVGFLWTKGIARFFILAFALGLA EWLRSILFTGFPWNALGYTAMPTPMLMQSDAIFGLYGMNILAVFIYSLPTVLFTDEKK KTALFLCLALILAHCGFGFYRLNTAPKMTDYQKSSYWVRIVQPSIEQNTKLSNTEREA IFAAHMNLSATSIVEQHPEPDFIVWPEASIPYLLYDNSTITMRIASLLKPKQWAIIGA IRASNNPLNEKTQYFNTIAVINATGNILTTSDKLHLVPFGEYLPYQNLLKKIGLHALA DTIGGYSTASVRKTVMMPNGFSYLPLICYEAIFPNEMVFKGSPPQAIINVTNDAWFGV TPGPYQHLQQVQLRAVELGIPLIRAANNGISAVIDSYGRIVVALQQNAVGIVDSPIPS PITPIGNNEYRIFSTFILFILMLLCGLGFGSTKQLK" gene complement(38336..39355) /locus_tag="AT237_RS01090" /old_locus_tag="AT237_04895" CDS complement(38336..39355) /locus_tag="AT237_RS01090" /old_locus_tag="AT237_04895" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_011179029.1" /GO_component="GO:0016020 - membrane [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="hemolysin family protein" /protein_id="WP_011180174.1" /translation="MANKVNAQNNSQTPSHIEEHPPQPANHTEKYSLMNHLFSFLRGR NSTSLRNDLTVALTADNEKDTALFSPEERTMLHNILRLREARIDDVMIPRSEIEALDI NTSLGEALKCFAKIGHSRIPVYAETLDDPRGMIHIRDILNYITRFITKSAQTEQTSDS LQLTYTDLHTPIGELDLIRTVLFVPGSMLASTLLTRMQTTRTQMALVIDEHGGTDGLV SMEDIVELVVGDIEDEHDHVDNAIVREPNNKWLVDARTELEDVEKALGPDFIVGEYGD EVDTIGGLIVSILDRIPAKGEIIEAVPGYRFRILEADKRRIKRLRIFRIPENESFKQN VISEE" gene complement(39458..39934) /gene="ybeY" /locus_tag="AT237_RS01095" /old_locus_tag="AT237_04900" CDS complement(39458..39934) /gene="ybeY" /locus_tag="AT237_RS01095" /old_locus_tag="AT237_04900" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_011179030.1" /GO_function="GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - RNA nuclease activity [Evidence IEA]" /GO_process="GO:0042254 - ribosome biogenesis [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="rRNA maturation RNase YbeY" /protein_id="WP_011180175.1" /translation="MITIDILVESDGWNDEKMLYNITEKALKTIMHHLSLENVVSEIS LLFTDDKHMAQINAQWRGKNKSTNVLSFPAFPLKVGDSPGPMLGDIIIARETVVLEAE NEAKSFQDHLTHMIVHGILHLLGYNHETNEEASHMEELERKILQKLSIKDPYAELS" gene complement(39955..41055) /locus_tag="AT237_RS01100" /old_locus_tag="AT237_04905" CDS complement(39955..41055) /locus_tag="AT237_RS01100" /old_locus_tag="AT237_04905" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_015398751.1" /GO_function="GO:0005524 - ATP binding [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="PhoH family protein" /protein_id="WP_011180176.1" /translation="MKASTQKVKRVKEKISTCSENTVISKKESASDVHHVVLIFENNK YAKTVFGKFDENLTYIEQKLGLSLHPRGNEILIHGKTTATKHAQYVLQQLYEHVKIYQ ELTLADIEGAISMANLPHNQQESPTKTQPVTKRIPARLSTHKKTIHARTPTQDAYIHA MESTELVFGIGPAGTGKTYLAVAHAAMLLERGIIERIILSRPAVEAGEHLGFLPGDLK EKVDPYLRPLYDALYDMIPIEKVERILASGVIEIAPLAFMRGRTLAHAAIILDEAQNT TPMQMKMFLTRLGEGARMIVTGDISQIDLPKGQKSGLIEAIRILSNVENITIIRFDEK DVVRHPLVAAIVCAYDRDSRAKNKETPSHTSH" gene complement(41219..42595) /gene="miaB" /locus_tag="AT237_RS01105" /old_locus_tag="AT237_04910" CDS complement(41219..42595) /gene="miaB" /locus_tag="AT237_RS01105" /old_locus_tag="AT237_04910" /EC_number="2.8.4.3" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_014923739.1" /GO_function="GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]" /GO_process="GO:0006400 - tRNA modification [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB" /protein_id="WP_038486950.1" /translation="MNKANPKNIPPLAPKKVFIKTYGCQMNVYDSQRMTDSLSSKGYV ATQTPNDADLILVNTCHIREKAAEKLYSDLGRLRVMRQERTPDKPLMVGVTGCVAQAE GSEILRRAPTVDLVIGPQMYHRLPDLLEQTKQGKKIVATEYAVEDKFAHLPPHNKRAV RKRGVSAFLTVQEGCDKFCTFCVVPYTRGAEISRSVEQITEEARQLIEAGVKEITLLG QNVNGWHGQNVNGKTWRLGDLLYHLAKLDGLKRLRYTTSHPRDMDESLIAAHRDLDIL MPYLHLPVQSGSDRILKAMNRQHKSIHYLQLIEKIRNARPDIAFSGDFIVGFPGETDE DFEETIKLIKQVEYSSAYSFKYSPRPGTVGATMKNHVEEAIKDARLQHLQVLLLEQQN SFLRSKIGQTTDVLIEKAGRHSGQMVGRSPWLLPVVVDTQASTGTVIPIHIKNTSSNS FVGEMTNM" gene complement(42627..43118) /gene="rimI" /locus_tag="AT237_RS01110" /old_locus_tag="AT237_04915" CDS complement(42627..43118) /gene="rimI" /locus_tag="AT237_RS01110" /old_locus_tag="AT237_04915" /EC_number="2.3.1.266" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_011180178.1" /GO_function="GO:0008999 - peptide-alanine-alpha-N-acetyltransferase activity [Evidence IEA]" /GO_process="GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="ribosomal protein S18-alanine N-acetyltransferase" /protein_id="WP_038486952.1" /translation="MSKLLSKKKHFWIAPLKVDDSVPLYQIHQHCFVPAWEKQTFDHF LTDQSIFGYKASLIGRPDEILGFCLCRLILDEAEIITIAVHPHCRRQGIGTLLIDSTL RHLHHERALKLFLEVEETNLSALNLYKGFEFQKIAKRFAYYQSKNSRTDAIIMQKTFK QID" gene complement(43118..43801) /gene="tsaB" /locus_tag="AT237_RS01115" /old_locus_tag="AT237_04920" CDS complement(43118..43801) /gene="tsaB" /locus_tag="AT237_RS01115" /old_locus_tag="AT237_04920" /EC_number="2.3.1.234" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_006589023.1" /GO_function="GO:0003725 - double-stranded RNA binding [Evidence IEA]" /GO_process="GO:0006400 - tRNA modification [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB" /protein_id="WP_011180179.1" /translation="MLILALDTASIYCAVALIRQKSVIARISERMNKGHAEKLIGYIA QVTNQANTTLDQINRIAVNIGPGSFTGVRVGVSTARALSLALEIPAVGVSALEALAMQ VSNNNTGLAITVVIEAGRDMFYHQNFSEDLIPLGAPGLKTIENIIEDLPQQTRLTGPA ADIIALHIKNNKINKKILRDKTVCEAADIVNYAHLAAKKQTQDHPRPLYLRSADAKQQ TDFALPRKK" gene complement(44385..45413) /locus_tag="AT237_RS01120" /old_locus_tag="AT237_04925" CDS complement(44385..45413) /locus_tag="AT237_RS01120" /old_locus_tag="AT237_04925" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_006589024.1" /GO_component="GO:0016020 - membrane [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="YeiH family protein" /protein_id="WP_075328038.1" /translation="MIKKNLAFLNDFSPGILACLLISVLAYGLEILEKQLFGQAWLES LVLAILLGSITGSCFTLPKYFQKGITFCAKTLLEIAIVLLGASISVNAVLSAGWNLLA SIIFVIFITLILSFTIGRLFGLSSHLAMLVACGNAICGNSAIVAVAPVIKAKHEEVAS SIAFTALLGVLIILFLPFLHPFLNLSFSQYGVLSGMVVYAVPQVLAATASVSFVSVQI ATVVKLVRVLMLGPLIFALSILYHRSAQTRLRLHTLVPWFIIGFTFMMLIRSSDLIPE KTLIPIRFIAQLFTVISMAALGLGVDIRSLKKAGWRVILASTCSILILGVCSLIMIQL NDLNPIMF" gene complement(45487..46092) /gene="recR" /locus_tag="AT237_RS01125" /old_locus_tag="AT237_04930" CDS complement(45487..46092) /gene="recR" /locus_tag="AT237_RS01125" /old_locus_tag="AT237_04930" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_011179035.1" /GO_process="GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="recombination mediator RecR" /protein_id="WP_011180181.1" /translation="MSKHIAGPEIERLIQLLARIPGLGPRSARRAALHLIKKKETLLE PLGAAIQAAVQKVCICSVCGNVDTIDPCSICTDPRRDDATIIVVEDIADLWALERAKT LAARYHVLGGKLSPLDGIGPDELNIAPLIQRVVQNPITEIILAVNATVEGQTTAHYIT DQLSNFSVKVTRLAHGVPVGGELDYLDDGTLAAALQARTNL" gene complement(46127..46453) /locus_tag="AT237_RS01130" /old_locus_tag="AT237_04935" CDS complement(46127..46453) /locus_tag="AT237_RS01130" /old_locus_tag="AT237_04935" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_011179036.1" /GO_component="GO:0005737 - cytoplasm [Evidence IEA]" /GO_function="GO:0003677 - DNA binding [Evidence IEA]" /GO_process="GO:0008150 - biological_process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="YbaB/EbfC family nucleoid-associated protein" /protein_id="WP_034447498.1" /translation="MRDMMNMMKKAKEMQEKMQKIQEEMANLQVTGTAGGGLVSITLN GKNAITAIKIDPSLLKPEEIEILEDLIMAAYNEAKTKIEIAMQEKTKSMTAGLPLPPG FKLPFS" gene complement(46468..48390) /locus_tag="AT237_RS01135" /old_locus_tag="AT237_04940" CDS complement(46468..48390) /locus_tag="AT237_RS01135" /old_locus_tag="AT237_04940" /EC_number="2.7.7.7" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_012230666.1" /GO_function="GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]" /GO_process="GO:0006260 - DNA replication [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit gamma/tau" /protein_id="WP_034447495.1" /translation="MKNMPVETTYRVLARKYRPQNFSDLIGQEAMVRTLTNAFETGRI AQAWMLTGIRGVGKTTTARILARALNYKTKDIDQPTTVLNTLGEHCTQIIEGRHIDVI EMDAASHTGIDDIREIIEQIRYRPVSARYKVYIIDEVHMLSTQAFNGLLKTLEEPPPH VKFIFATTEIRKVPITILSRCQRFDLRRIESAALSAHLRQIAQHENVEVEDQALSMIA RAAEGSARDALSIFDQAIAHSNGKISAVTVRAMLGLADQARIIDLFEFLMKGNVVNAL HELRSQYDAGADPLTILTELADFNHLVTRLRFTPEILEDLSLTEDERLRSLDFSKKLS VPVLSRNWQMLLKGLQEVNQTARPLQAAEMLLIRLAHVTDLPTLDEALKKLMQETTPL TIVSNSSHQESTSTNNTTKIEAANAYSSLQVANPSSHQPDCKTSVTNHLNDCLQSENL LKFQNLESSHSPEVTEILETSQSVTNPQNITNLPHPSTHITKQATEPKAIVIDSLHDI VKLAEQHDEITFKLLITEFVHPVSFEPGHIILRIAENAPHSLKNDIKKMLSQWTEKRL TITFVNEGGGPTLQEESMAIQKTLFSNAEADPDIAKILYHFPEAKIVDIRLNKQENNL DLLPNTFKNESDIDDE" gene complement(48613..48710) /gene="ffs" /locus_tag="AT237_RS01140" ncRNA complement(48613..48710) /ncRNA_class="SRP_RNA" /gene="ffs" /locus_tag="AT237_RS01140" /product="signal recognition particle sRNA small type" /inference="COORDINATES: nucleotide motif:Rfam:14.4:RF00169" /inference="COORDINATES: profile:INFERNAL:1.1.5" /note="Derived by automated computational analysis using gene prediction method: cmsearch." /db_xref="RFAM:RF00169" gene complement(49664..50071) /locus_tag="AT237_RS01145" /old_locus_tag="AT237_04945" CDS complement(49664..50071) /locus_tag="AT237_RS01145" /old_locus_tag="AT237_04945" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_007347637.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="WP_034454065.1" /translation="MRKILTQGLVVANILACSTVAFAGFSETKWNFASDESVTIEAAD TIHQGVEYACKAFKPKKASFVLSYSSPSDLDKLKIVADNEKKITHDKEHKVFTLKGVK SLHISFPSSGHYTFKNITKKKVIGINCDTGDYD" gene complement(50543..51406) /locus_tag="AT237_RS01150" /old_locus_tag="AT237_04950" CDS complement(50543..51406) /locus_tag="AT237_RS01150" /old_locus_tag="AT237_04950" /EC_number="4.2.1.51" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_007347636.1" /GO_function="GO:0004664 - prephenate dehydratase activity [Evidence IEA]" /GO_process="GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="prephenate dehydratase" /protein_id="WP_011180186.1" /translation="MKILKKTNKISFQGEYGANSHIACTNMFPNMDALPSTTFEDALN LVENGQADLAMIPIENTLAGRVADIHHLLPQSSLYIIDEYFLPIHFQLMVLPGVTHKE IETVHSHAHALAQCRKIIRNNGWQPVTSADTAGAAKFIKKNGKRSQAALAPLIAAELY GLDILEKNVEDSPHNITRFVILSRSQRHVPKPQNGEKIITSLLFRVRNVPAALYKAMG GFATNGINMTKLESYQIGGNFNATQFFVDIEGHPEDPMMQLALDELSFFSAELRIIGI YPAKNGRRSHI" gene complement(51403..52134) /locus_tag="AT237_RS01155" /old_locus_tag="AT237_04955" CDS complement(51403..52134) /locus_tag="AT237_RS01155" /old_locus_tag="AT237_04955" /EC_number="2.7.7.38" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_011179039.1" /GO_function="GO:0008690 - 3-deoxy-manno-octulosonate cytidylyltransferase activity [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="3-deoxy-manno-octulosonate cytidylyltransferase" /protein_id="WP_011180187.1" /translation="MALEPIILIPARIGSTRLPQKALAEIAGKPMIVHVAEQAKKAAF GRIIVATDHNNIAKVVTAYGHECIITCRDHKSGSDRIYEALTHIDPERRYNVILNVQG DLPTITPHEIISALRPLENSLTDIATLGAKIVEENEKTDPNIVKIIGTPLSHNRFRAL YFTRATAPYGDGPLYHHIGIYAYRREALEKFVALKPSPLEQREKLEQLRALEHNMRID VEIVDTIPLGVDTQRDLERVRKILA" gene 52241..52792 /locus_tag="AT237_RS01160" /old_locus_tag="AT237_04960" CDS 52241..52792 /locus_tag="AT237_RS01160" /old_locus_tag="AT237_04960" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_007551826.1" /GO_function="GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="c-type cytochrome" /protein_id="WP_011180188.1" /translation="MNRSKIVYFVFACLFLLIILVGILSYRIYDNSASVQPSKVTKND RLKEKQQTSDISLSLNDRLQRANIENGRKIFRQCGLCHTSGRHESNRVGPALWGIIDR PLAAKTDFAYSRVLRANSDQRWDFMTLDRYLQSPREAFPGTIMFFRGIKNDQDRADLL LYLRGLSDDPVPLPNDKKEDKPG" gene 52931..54052 /gene="yejB" /locus_tag="AT237_RS01165" /old_locus_tag="AT237_04965" CDS 52931..54052 /gene="yejB" /locus_tag="AT237_RS01165" /old_locus_tag="AT237_04965" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_009449400.1" /GO_component="GO:0016020 - membrane [Evidence IEA]" /GO_process="GO:0055085 - transmembrane transport [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="microcin C ABC transporter permease YejB" /protein_id="WP_011180189.1" /translation="MVVYILRRFFLLIPTLIGILTVTFIIVQFTPGGPIENIIAQLQG TGGDAVGRVGGGSDLGLSSDVILDGAEVESSSSRVFKYRGAQGLDPEFIAKLEKQFGF DKPPLERYLTMLGRYLRFDFGDSYTQGRSVIELIKSALPVSLSLGFWQLLISYSISIP LGIQKALKEGAPFDVWTSALIIIGYAIPSFLFGIFLMVFFAGGSFLNWFPLSHLTSDN FDQLSFGGKILDYLYHLVLPLTAMIISSFATTTLLTKNCFLEEIRQQYVITARAKGLS ERSVLYGHVFRNAILIVIASFPATFMASFFSGSLLIEMLYSLNGMGLLSYTSIVNRDY SVVFASLYIFSLIGLIVSLISDIVYMFVDPRIDFDKKDL" gene 54052..55194 /locus_tag="AT237_RS01170" /old_locus_tag="AT237_04970" CDS 54052..55194 /locus_tag="AT237_RS01170" /old_locus_tag="AT237_04970" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_006589033.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="WP_011180190.1" /translation="MQETKGECVQSFKLQKEPFFSPLNARRWCNFKRNRRGWWSLWLF LFLCFCSFSAEFIANDRPIIASYKGELLFPVFFDYPDEKFGGDLVVADFRDPFIQNEI AKHGWALWPLVRYSYNTVMGNKTVALAPPFWLQSKEERCINYTQGSSDPECTISRWNW LGTDDLTRDIFARVLYGFRVSIAFSILLTVISTIIGVTVGAIQGYFGGWVDLILQRLI EIWSSVPSLYLVIIMAAVLTQGFWVLLGVMLLFQWVILVGVVRVEFLRARNFTYVNAA RALGVPNSTIMMRHLLPNAMVAALTYMPFLLTSGVSLLTSLDYLGFGLPPGYASLGEL MRQATTNLNAPWIGITGFVVIAVMLSLLAFIGEAARDAFDPRKTLQ" gene 55191..56801 /locus_tag="AT237_RS01175" /old_locus_tag="AT237_04975" CDS 55191..56801 /locus_tag="AT237_RS01175" /old_locus_tag="AT237_04975" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_004857026.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="WP_011180191.1" /translation="MTNLLSVRDLSIALCQGQEQRYILEKVTFEIKEGETVALVGESG SGKSVTALSILQLLPFLKTLYQSGEILFNDKDLLKQKEEDLRKVRGKDIAMIFQEPMT ALNPLHNVERQIGEVLKMHSDMTNQSLRAHIIDLLTQVGIHEPQKRLGSFPHELSGGQ RQRVMIAMALANNPRLLIADEPTTALDVTVQARILELLVHLKKQNNMSMLFITHNLAI VRCIADRVYVMRKGKIVESAPIDQLFANAQKPYTKQLLAAEPKGYPLQADKSAPILMQ GKKVRVWFPIKKGLLRRTKGYIKAVQDMDVTIRVGQTLGVVGESGSGKTTLGLSLIRM LSSKGQIIFDDIDISNFTFKKMRSLRRHIQIVFQDPFGSLSPRMSVSEIIAEGLSIHE PKLSYSERNDRVIEALHEVNLDPSTRYRYPHEFSGGQRQRIALARAIILKPRFIMLDE PTSSLDVSVQAQIISLLLHLQKKYHLGYLFISHDLKVIKALAHEVIVMRNGEMVEYGS ADRIFSCPQNTYTQSLMAAAFALESDRL" gene complement(56747..>56902) /locus_tag="AT237_RS08920" /pseudo CDS complement(56747..>56902) /locus_tag="AT237_RS08920" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_006922868.1" /note="incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology." /pseudo /codon_start=1 /transl_table=11 /product="thiamine biosynthesis protein ThiF" gene complement(57024..57788) /locus_tag="AT237_RS01180" /old_locus_tag="AT237_04980" CDS complement(57024..57788) /locus_tag="AT237_RS01180" /old_locus_tag="AT237_04980" /EC_number="2.7.7.80" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_004857024.1" /GO_process="GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="molybdopterin-synthase adenylyltransferase MoeB" /protein_id="WP_011180192.1" /translation="MIQEANTKLSNEEIERYARHIILPEIGGVGQQKLKAARVLVIGA GGLGAPVLTYLAAAGVGTLGIVDNDIVSLSNLQRQVIHKTNTINQCKTDSAKATINAI NPHVTVEKHTLRLDKSNVGKLLNAYHIIVDGSDNFATRYLLADHTAQCAKPLISGAVG RFDGSLTVLMPYKDNNPHYRDLFPNPPAPGTLSTCAETGIIGALPGVIGTLQAMEAIK LITNIGEPLVGKILLYNGLSAQFKVITYKRSDSNAN" gene 57877..58815 /gene="gshB" /locus_tag="AT237_RS01185" /old_locus_tag="AT237_04985" CDS 57877..58815 /gene="gshB" /locus_tag="AT237_RS01185" /old_locus_tag="AT237_04985" /EC_number="6.3.2.3" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_014923752.1" /GO_function="GO:0005524 - ATP binding [Evidence IEA]; GO:0004363 - glutathione synthase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]" /GO_process="GO:0006750 - glutathione biosynthetic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="glutathione synthase" /protein_id="WP_011180193.1" /translation="MKIAIQMDHISTLQIQGDTTFALALAAQERGYSLFHYTPDRLSM RDGCVIVKLEALTVHDKEGNHYQLGKPIRTQLMDMDVVLLRQDPPFDLNYITTTHLLE CIHPKTLVVNDPAWVRNSPEKIFVTEFPDLMPETLITKDIEEITAFRATFGEIIVKPL YGNGGAGVFHLKQDDRNLASLLEIFAQIYREPFIVQRYLDAVRKGDKRIILLDGKPVG AINRIAAETDVRSNMHVGGRAENVDLTKRDYEICQRIGPALKERGLLLVGIDVIGDYI TEINVTSPTGIREIKRFSGTDIAHLFWDVIEFKRSN" gene 58965..60011 /locus_tag="AT237_RS01190" /old_locus_tag="AT237_04990" CDS 58965..60011 /locus_tag="AT237_RS01190" /old_locus_tag="AT237_04990" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_012230685.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="PstS family phosphate ABC transporter substrate-binding protein" /protein_id="WP_011180194.1" /translation="MSRLLSGGVGVIFAVLFSVNVGNARDQIQITGSSTVLPYQKIVA EIFGEIYPHFKIPVIESGGTGGGIKEFCRGIGENAIDIVNASRAMKLSELQSCFDAGV KDVEEIRIGYDGIVFATDINGPDWKLQPVDIYRALAARIMKDGKLQSNNVSKWSAVNS ALPGWTIAAYIPGEKHGTREVFEEKLLAAGCKESGAVDAMKSLGMDDKAIHIACVAVR KDGKVIDIDGDYSETFARLTSNKTGVGVFGLSFYQNNADRLKVADISGFTPTVETISS GKYPVSRPLFFYVKKAHLGIIPGLREYVDFFLSDQMIGPNGPLAEYGLVVASEKERQA QRSAFSAGRVMSLK" gene 60077..61537 /gene="pstC" /locus_tag="AT237_RS01195" /old_locus_tag="AT237_04995" CDS 60077..61537 /gene="pstC" /locus_tag="AT237_RS01195" /old_locus_tag="AT237_04995" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_004864358.1" /GO_component="GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]" /GO_function="GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="phosphate ABC transporter permease subunit PstC" /protein_id="WP_011180195.1" /translation="MRISFLISLLLIFACIGFCISYIRARTLEYTQYKMHSRTYYYGW WTFLITVFPALIFLIFWDGGSAIYLEYSASQEIEACSTHVKELVNHDLILGIVRSLVK RLPYFEGDLTTASYEEVQAQLLAKGFVFPHEVSDDVLRIAQSWVNSSEKLQFIGHGVL FVIASCGFICGIMQVSPRQRARNKVECLIVIGLICASIVAVLTTAAIALSMFFQTMSF FQSVPFSNFFLGTVWDPRFSASGAEGEVGQFGLIPLLAGTLYIAFVAMLFAVPIGLFS ALYMAEYASARLRSIVKPLLEVLAGIPTIVYGFFALKFVGPFLRDLSVSLSGGVGFIM AQSVLTAGVVMGIMLIPFVSSLSDDVITAVPRILREGSYGLGATQSETIKKVVIPAAL PGIMGAILLTASRAIGETMIVVLAAGVAANLTLNPFEAMTTITVKIVNQLTGDFEFNS PQTLVSFALGMTLFIMTLLMNILALYIVRKYREQYE" gene 61534..62826 /gene="pstA" /locus_tag="AT237_RS01200" /old_locus_tag="AT237_05000" CDS 61534..62826 /gene="pstA" /locus_tag="AT237_RS01200" /old_locus_tag="AT237_05000" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_004858701.1" /GO_component="GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]" /GO_function="GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="phosphate ABC transporter permease PstA" /protein_id="WP_011180196.1" /translation="MNEDFSFSRRNIGLKRRYWAERRFRAYGLIAIFIGLFFLFALLW SVISQGYTAFFQTEMTLSIYLDEKVIDPSGQRLANPQILITANYPLLVRNALARKLNI DQNDRASLRDINRMFSNSVRVQLREIVTKNPQLIGTTQKIKVLAAADIDSAYKGQIDL HVAEKNRKISNRQVEWMKRLAYDGTLYKTFNFGFFTFGASSRPETAGLGVAIIGSFYM IIIVLVISLPIGIATALYLEEYARKNKFTDFIEVNINNLAAVPSIVFGLLGLAVFVNF FGLPRSASFVGGLVLALMTLPTIIIATRSALRAVPFSIRAAALGLGASKTQVVFHHVL PLAAPGILTGTIIGVAQALGETAPLLLIGMVAFVVNIPATPMDPATALPVQIFMWAGE AERAFVEKTSGAIIVLMIFLSIMNISAVFLRRRFERRQ" gene 62885..63643 /gene="pstB" /locus_tag="AT237_RS01205" /old_locus_tag="AT237_05005" CDS 62885..63643 /gene="pstB" /locus_tag="AT237_RS01205" /old_locus_tag="AT237_05005" /EC_number="7.3.2.1" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_011180197.1" /GO_component="GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]" /GO_function="GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="phosphate ABC transporter ATP-binding protein PstB" /protein_id="WP_011180197.1" /translation="MKIKMRGQDVKVFYGSKEALHGITLDIPEHQVTALIGPSGCGKS TFLRCFNRMNDTIEGAKITGLITLDGENIYESRIDVVELRARVGMVFQKPSPFPKSIF ENVAYGPRIHGLVKSRAELHDVVEKSLRQAGLFEEVKDRLHEAGTSLSGGQQQRLCIA RAIAVSPEVILMDEPCSALDPIATARIEELIDALRKDYTIVIVTHSMQQAARVSQYTA MFHLGHLVEVGETEVMFTSPKEQRTQDYITGRFG" gene 63665..64387 /gene="phoU" /locus_tag="AT237_RS01210" /old_locus_tag="AT237_05010" CDS 63665..64387 /gene="phoU" /locus_tag="AT237_RS01210" /old_locus_tag="AT237_05010" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_004858704.1" /GO_function="GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]" /GO_process="GO:0051049 - regulation of transport [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="phosphate signaling complex protein PhoU" /protein_id="WP_011180198.1" /translation="MSMKHTVRAYDAELKYLEEKITEMGCYAEKMIERSVASIVCNDL QLAATVIADDLFLDEAERDIDEKAITIICKRQPMAVDLREIVGAIRISSDLERIGDMA KNIAKRTVALSEIRQPKVFYCRFETITTLALNQLKEVLNAYTSRLLDHVDAVRERDGK IDALYTSLFRELLTYMTEDMRNITVCTHLLFCIKNIERIGDHVTNIAETLHYIITGYH MSFDRPRDDLTYKVGIDEKEID" gene 65852..66697 /locus_tag="AT237_RS01220" /old_locus_tag="AT237_05020" CDS 65852..66697 /locus_tag="AT237_RS01220" /old_locus_tag="AT237_05020" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_006926221.1" /GO_function="GO:0016787 - hydrolase activity [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="cell wall hydrolase" /protein_id="WP_011180199.1" /translation="MKKNFLTAFISCFLAPFVIVGCASDHFNAGKVGDNKKAKTAVYP LTERQCLMRAMYFESNRTSREGMIAVGTVVMNRVNSSAYPKTICGVVGQYKQFAPGVL TRPMTEPASVARVREAADAVLRGERDKKVKNAKFFHTAGLSFPYKNMHYVRIAGGNAF YEKRSRDGSLQVPHNDRPYDVAYAFAQERSGNVPSFMDVGLASKEIKTEERQNASPSI EVAKVDKAHTTPFVVVQLDKVPIPTYAPNRTNEETKPALAYTLLSSDQLNAVVAMLEE RYRSR" gene 66729..67976 /locus_tag="AT237_RS01225" /old_locus_tag="AT237_05025" CDS 66729..67976 /locus_tag="AT237_RS01225" /old_locus_tag="AT237_05025" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_005866081.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="aminopeptidase" /protein_id="WP_011180200.1" /translation="MYFDIHETISSEKLNRLAEITVKVGLNLQKGQDLVLTAPISALP FVRRIAYHAYKAGAGVIIPLFSDDMLLLTRFENAHTASFDCAPSWLYEGMAQAFRNGA ARLAIVGDDPSLLSNQDFNKVARLSKATSIAYQPALKEISNFAMNWSIVAYPTAGWAA TIFPALPINEAIKKLADAIFSASRVTGEDPVHAWGVHNANLKQRSSWLNEQRFSALHF KGPGTDLTVGLADDHEWQGGASVAQNGVVCNPNIPTEEVFTTPHAHKVEGFVRSTKPL SYQGTLIKNIEVRFEAGRIVEARASKGQEVLQQVLQSDEGASRLGEVALVPHSSPISK SDLLFYNTLFDENAACHIALGQCYSKCFLNGASLTPEEIAARGGNKSVIHIDWMIGSG EIDIDGITQEGMRVPVFRKGEWA" gene 68035..68910 /gene="mutM" /locus_tag="AT237_RS01230" /old_locus_tag="AT237_05030" CDS 68035..68910 /gene="mutM" /locus_tag="AT237_RS01230" /old_locus_tag="AT237_05030" /EC_number="3.2.2.23" /EC_number="4.2.99.18" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_012230700.1" /GO_function="GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0019104 - DNA N-glycosylase activity [Evidence IEA]; GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]" /GO_process="GO:0006284 - base-excision repair [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase" /protein_id="WP_011180201.1" /translation="MPELPEVETVRRGLEPVITGAKIVSVTLNRRDLRFPFPEAFSER LIGRTIMGLGRRAKYLLFHLSQNETILSHLGMSGSWRIEDDFLRERSSTVSKFVKHDH VVMDIQAKDGKVYHLTYNDVRRFGFMLLVDTRSLYEHPLLKKLGLEPMSNAFSGSYLQ EVFVNKKISLKGVLLDQSIVAGLGNIYVCEALWRSRLSPQRGAFTLALKTECARELAA SLAQNIRNVITEAISSGGSTLRDYIRTDGSLGYFQHSFSVYGREGKECLHCGIPIVRI LQSGRSSFYCSQCQK" gene 68994..70382 /locus_tag="AT237_RS01235" /old_locus_tag="AT237_05035" CDS 68994..70382 /locus_tag="AT237_RS01235" /old_locus_tag="AT237_05035" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_011179051.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="M20/M25/M40 family metallo-hydrolase" /protein_id="WP_011180202.1" /translation="MLNKVLTHLDENIEKSLERLFSLLRFQSISTDFAYKDECRKAAD WLVEDLKSIGFKASRRDTSGHPMVVGHHPGPSDDCLHVLFYGHYDVQPVDPLNLWEDD PFTPSLKEREGEKVICARGASDDKGQLMTFIEACRAFKKETGQLPVRVTVLFEGEEES GSSSLVPFLKANKDELKADCALVCDTSMWDADTPSVSVALRGILGEEIIITAANRDLH SGYFGGAAANPIRILTKVLAGLHDENNRVTLPGFYDGVEETPPHILQSWNALNCTAEN FLGPIGLSLPAGEKGRSVLELVWARPTAEINGISGGYEGEGIKTVIASQASAKVSFRL VHKQDPEKIRQAFRDYVCSLIPADCSVVFKEHGASPAIQLPYDSPFIKAAKDALSQEW NNPALLTVMGGSIPIVADFQSILDMETLLVGFALADDRIHSPNEKYNLKSFHKGQRSW ARILATLAKTGG" gene 70383..71003 /locus_tag="AT237_RS01240" /old_locus_tag="AT237_05040" CDS 70383..71003 /locus_tag="AT237_RS01240" /old_locus_tag="AT237_05040" /EC_number="3.1.-.-" /EC_number="3.1.13.5" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_010657971.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="ribonuclease D" /protein_id="WP_011180203.1" /translation="MTEIRVHQGDLPNLDNYRIDAVAVDTETLGLQPHRDRLCVVQLS SGDGTADVIQIAKGQKSAPNLVRLLSDRDITKIFHFGRFDLAILAHTFGVMPDVVFCT KIASKLTRTYTDRHGLKEICGELLNVNISKQQQSSDWAAETLSRAQIEYAASDVLYLH RLKDIFEERLKREERESVAKACFQFLPMRANLDLLGWSEIDIFAHS" gene 71596..71907 /locus_tag="AT237_RS01245" /old_locus_tag="AT237_05045" CDS 71596..71907 /locus_tag="AT237_RS01245" /old_locus_tag="AT237_05045" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_004864375.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="WP_011180204.1" /translation="MNMKYFITASATFVSISVAQVATASVVATQKLVEGVSSSRSFLS DAYRSKSLDKVLRAEFACLDNNQGKAVELVTVASSTQRRGSRGGGRRGRPQFSRGPMS F" gene 72964..73794 /locus_tag="AT237_RS01250" /old_locus_tag="AT237_05050" CDS 72964..73794 /locus_tag="AT237_RS01250" /old_locus_tag="AT237_05050" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_012754662.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="outer membrane protein" /protein_id="WP_011180205.1" /translation="MNIKWLITASAFTFVSVAQAADIVVPPSPTPVAPVIVAPTFSWT GFYIGGQIGGFSSKTKMDILSKGKTIPVSDDFLPKLSGFMGGLYAGSNVDLGNGLILG VDTDIIWTDKDDTKTVPPYEIAENHVNYVNKMLKDAGINIGDNKLEAGKYTRALGFTF KEKWAGATRVRIGFAAERIMPYVAGGIAYTQLQDITSISITKKETGKVIASGNLSDET KTLVGYTLGAGVDLAMTNNVIVRAEYRYSDFGKKKFSNDKYETSYKTNDFRVGVAYKF " gene 74128..74967 /locus_tag="AT237_RS01255" /old_locus_tag="AT237_05055" CDS 74128..74967 /locus_tag="AT237_RS01255" /old_locus_tag="AT237_05055" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_004864382.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="porin" /protein_id="WP_011180206.1" /translation="MNIKSLMTTSVIALISASAAQAADVIVPHEVAPTVISAPAFSWT GFYIGGQVGNFSSKVEITDPNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGV ETDAVWADREDAKTSSAEAIGQDELETFRDSLKKANAAFAQGKTSDNVAAVDKHTDSL ALKEKWSGATRVRIGFTAADRIMPYVAGGVSYAQVQAVSSTKVTQAADDAEIATAQLF DKTKTLVGFTLGGGVDFAMTDNVLLRAEYRYSDFGKKKFEKEGSEFSYKTNDFRVGVA YKF" gene 75465..76640 /locus_tag="AT237_RS01260" /old_locus_tag="AT237_05060" CDS 75465..76640 /locus_tag="AT237_RS01260" /old_locus_tag="AT237_05060" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_006589051.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="outer membrane protein" /protein_id="WP_011180207.1" /translation="MNTKRLITVSIWALIAASTAHAADVGIPRQSVLAASPVITAPTF TWTGFYAGIQAGGFSSKTDLSIVGKDKTVPLSKDLSPKLSGFEGGFYAGSNINLGDDF IFGVDTDLTLSGQKHTKTIIIGVDDNAAVENAVARSGRSTRSASGNTSTTTQSSVSAV SSSVIESALTLAKPAAANTGTHAHGHSGRQGGDAHSTYHGAGNGAYPHSMGAHSHVAN PHASNPHGTQNMAGRTTQSTKVAEKNASGIYGIEQVKKEAYEHGLSQYGNVETLSHTL KQNWAGATRVRVGFSVDRVMPYFAGGIAYAQLHDTISISIKKNDESVVTSKNLTDEKK TMIGYTLGGGVDFAMTDNVLLRAEYRYSDFGKKKFAKEKLEINYKTNDFRVGVAYKF" gene 76893..79808 /gene="ileS" /locus_tag="AT237_RS01265" /old_locus_tag="AT237_05065" CDS 76893..79808 /gene="ileS" /locus_tag="AT237_RS01265" /old_locus_tag="AT237_05065" /EC_number="6.1.1.5" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_007347617.1" /GO_component="GO:0005737 - cytoplasm [Evidence IEA]" /GO_function="GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]" /GO_process="GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="isoleucine--tRNA ligase" /protein_id="WP_011180208.1" /translation="MTVKNETVDYSKTLYLPQTNFPMRAGLPQKELELMERWEKRGLY AQLRQQAKDRPLYTLHDGPPYANGHIHIGHALNKVLKDVIIRSFQMRGFNANYVPGWD CHGLPIEWKIEEKYRAQGKNKDDVPLNEFRQECRQFAQHWITVQSEEFKRLGVVGDFN RPYTTMAFHAEARIASELMKFALSDQIYRGSKPVMWSVVERTALAEAEIEYHDHESDV IWVKFPVLQADSKDLYDAYVVIWTTTPWTIPANRAVSYSSQISYSIYEVKSAENDFGP QVGEKLLFADALVMSCAEKAKLVLKRLRVISAKEFKTLVLSHPLKGLAGGYNNKIAML DGSHVTESAGTGFVHTAPSHGREDFEIWNAYKPLLEQSGIDSSIPFPVDDAGFYTKDA PGFGPDRKGGAIRVIDDNGKMGDANKEVINALIKADRLFARGRLKHSYPHSWRSKKPI IFRNTPQWFISMDKDLGDGSTLRSRALKAISMTRFVPSSGQNRLASMIADRPDWVLSR QRAWGVPICIFANEDGVILKDERVNERILRAFEAEGADAWFAEGARERFLGERAHESW IQVVDILDVWFDSGASHSFVLEDRDDLNWPADVYFEGSDQHRGWFQSSLLESCGTRAC SPYKAVITHGFTLDENGKKMSKSLGNTVVPQEIIKTFGADIFRLWVMTTDYWEDQRLG KQILQTNVDSYRKLRNAIRWMLGTLAHDEGEEISYCALPDLEKLILHRLSELDQLVNR AYDDFDFKKIMRALLDFSITELSAFYFDIRKDSLYCDPPSSKKRKASLQVVREIFERM VIWLAPMLPFTMEEAWLERYPESTSVHLEQFRPVPMEWQNESLAERWKKIRQVRKVVT GALELERADKRIGSSLEAAPIVFISNPVLREALENLDMAEICITSALTITQGVPPSDA FILSDVEGVGVYPRKALGTKCARSWRYTQDVGSDPTYPDVSARDAAALRELQVLGKI" gene 80004..80597 /locus_tag="AT237_RS01270" /old_locus_tag="AT237_05070" CDS 80004..80597 /locus_tag="AT237_RS01270" /old_locus_tag="AT237_05070" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_006922899.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="WP_011180209.1" /translation="MKKREVKIFSTSMLGVYLILTGCSAPTYGTGKPASLQFFEDVAN ITSLTPTNNNSQLVMKPHPKLVMPSSSALRFLPPPQQDVAQESSFNGKATLNQHTGSG KVFGFPKKVSSMNGDIDSSKSVSRLSTKQRYEYLRLQRAQVGSAQYRQYLTEPPLSYR QPARIAPVGQQDKDEVEALKERERKNTSKMRSDKKSL" gene complement(80660..81106) /locus_tag="AT237_RS01275" /old_locus_tag="AT237_05075" CDS complement(80660..81106) /locus_tag="AT237_RS01275" /old_locus_tag="AT237_05075" /EC_number="3.5.4.-" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_011180210.1" /GO_function="GO:0052717 - tRNA-specific adenosine-34 deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="nucleoside deaminase" /protein_id="WP_011180210.1" /translation="MTLTPMEIALLEAQWAAKKDEVPVGAVITRGQSIIVRAGNSIKA AYDPTGHAEIRVIRMACAAFQSERLPDCDLYVTLEPCAMCAAAISFARIRRLYYATSD PKGGAIEHGPRLYKQSTCHHSPEVYSGFKEKEAAQLLKDFFAQKRC" gene 81382..82779 /locus_tag="AT237_RS01280" /old_locus_tag="AT237_05080" CDS 81382..82779 /locus_tag="AT237_RS01280" /old_locus_tag="AT237_05080" /EC_number="5.4.99.-" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_017196236.1" /GO_function="GO:0009982 - pseudouridine synthase activity [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="pseudouridine synthase" /protein_id="WP_011180211.1" /translation="MNENSESERIAKRLARAGIASRRDAEMMILAGRIVVNGTVVTTP ALNVTRSDVIKVDGKPLSPIERTRLWLYHKPAGLVTTHRDPEGRPTVFSNLPKEMPRV LSVGRLDINTEGLLLLTNDGGLARVLELPLTGWVRKYRVRAHGRVKQSALDNLKNGIA IDGIFYGSIEASIEREQGSNIWLSVALREGKNREIKNILGALGLSVNRLIRISYGPFQ LSDLEEGAVREIKGRMLRDQLGERLIMQANADFDAPILKPFSNTAVVAEKRSHKDLTV ANDGWISSHGGDLRRRQRKSSAERGRTRLSTKLDKKFMGKEKSEEGKIERFLPRSRHS NVWMAPGARPQSAHRKSFYSEGIHHAHKSDLSVNRSFHRAKQSKDQLRKEKGVGFDQK RGKTSYSKARVSNKKGDFFKKEGKVMKDSHDEHPFENRRRAKSFDGTMKKSRTHSGHT KTAKRFGGSRASRRR" gene 82760..83329 /gene="rsmD" /locus_tag="AT237_RS01285" /old_locus_tag="AT237_05085" CDS 82760..83329 /gene="rsmD" /locus_tag="AT237_RS01285" /old_locus_tag="AT237_05085" /EC_number="2.1.1.171" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_006926206.1" /GO_function="GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]" /GO_process="GO:0031167 - rRNA methylation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="16S rRNA (guanine(966)-N(2))-methyltransferase RsmD" /protein_id="WP_011180212.1" /translation="MRVVGGKFAGRVLFAPVGQSIRPTSDRTRESLFNIFASQEGQFW VNKRILDLFAGTGALGIEALSRGAKAAVFVENSVEGRGLIQKNLEALELQSIGRILRR DATKLGNIGTMLPFDVICADPPYGRCLGERAFMEVLQGGWAKANTLFVLEEKKDAIIH LPEIFYLDDERFYGETTIRFYKLRSSLQV" gene 86184..87515 /locus_tag="AT237_RS01305" /old_locus_tag="AT237_05100" CDS 86184..87515 /locus_tag="AT237_RS01305" /old_locus_tag="AT237_05100" /EC_number="3.4.-.-" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_006589065.1" /GO_function="GO:0008270 - zinc ion binding [Evidence IEA]" /GO_process="GO:0006508 - proteolysis [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="TldD/PmbA family protein" /protein_id="WP_011180213.1" /translation="MTDKNQIDKAASLVEEAKRSGADAADAVIVRAHSTSVSVRFGKV ESTEASESDNFTLRVFVGKKVASVSANLATFPQELAERAVAMAKASPDSLFEGLADKE YLATHPKDLDLFDNFVPNSHFLTEDALKMEAAALSVKGVSNSGGAATAYGCSGFVLVT SDGFCGAYRSSFFSRSCSALAGEGTAMERDYDYTTALHFSDLEAAEIVGRNAGLGAVR RLGAVRAATGGVDVIFDPRTARGIAGHIAHMVNGASVARKTSLLQNFLGKAVMKPYVN VTDQPLRLRGNSSRPFDGEGVEGQTLHIIENGILQNWLLSSSSARELGLKTNGHGVRS ASSVQPARTNFAIEPGLVSPHDMIKDLQSGFYVTELFGHGVDFVTGQYSRGASGFWIE NGEITYPVSEVTLGSNLLHMLAHLTPASDIDRRYGTAAPTLLIEGMTLAGK" gene 87502..88305 /locus_tag="AT237_RS01310" /old_locus_tag="AT237_05105" CDS 87502..88305 /locus_tag="AT237_RS01310" /old_locus_tag="AT237_05105" /EC_number="3.1.3.7" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_004865211.1" /GO_function="GO:0008441 - 3'(2'),5'-bisphosphate nucleotidase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]" /GO_process="GO:0006790 - sulfur compound metabolic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="3'(2'),5'-bisphosphate nucleotidase CysQ" /protein_id="WP_034447481.1" /translation="MQENNTHHSSDLNLLLDVCREAGNLAMKYFGCELDVWIKEGNSP VSEADLAVDHFLKERLLVARPNYGWISEETKDNRSQRSYERSFVVDPIDGTRGFLSGS TYWCVSIAIIENGRPIIGVVQCPAQGNVYAAVTGEGATLNGIKLPLLPSQVNRKYKVS LDKSLAQKLPDDFCNQVSFYRHIPSLAYRIVLVAQGEIDIVLIRPNCHAWDIAAADLI LQECGGYFLPLDAPFLSYGIEPYQYGFLVAGKNNCCQNMIDVVRQAKLV" gene 88351..88596 /locus_tag="AT237_RS01315" /old_locus_tag="AT237_05110" CDS 88351..88596 /locus_tag="AT237_RS01315" /old_locus_tag="AT237_05110" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_005774085.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="DUF4170 domain-containing protein" /protein_id="WP_011180215.1" /translation="MIETNEKKQYLHLVFGGELKNLNSNQFKNVDDLDVVGIFPDYQS AQEAWHAKAQSTVDNALQRYYILDLHRLLDLENGDAE" gene 89420..90742 /gene="waaA" /locus_tag="AT237_RS01325" /old_locus_tag="AT237_05120" CDS 89420..90742 /gene="waaA" /locus_tag="AT237_RS01325" /old_locus_tag="AT237_05120" /EC_number="2.4.99.12" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_012754675.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase" /protein_id="WP_011180216.1" /translation="MVELKAHAALLIYRMIGFCLRPVVPFYLFVRTIRGKEEWCRQKE RLGKSYQVRPPSPLIWLHAASVGETFALFPLINYILSLKINILLTTGTVTSSSLVKKH FGKRLIHQYAPLDLDLAVRRFISHWKPDLALICESEVWPLRIKELAKMRIPQILVNAR MSEHSFKAWQKRPVLARHIFRHIDLVIAQNKRDVAYYHALGVKSVALSGNLKADVFWV EDQALLAHYRDAIGNRPVWAAVSTHEGEEEIAFEVHKILKNYLPDLLTIIVPRHPERS EDLIKKCSNKGLHFIRRSNSAAPERDTDVFLGDTIGEMGLFLRLSKVSFLGKSLCGEG GHNPLELALLGSAILTGPHVSNFQEMFEQFLMRDAAYMVQDKKQLAIQVYRLLTNELL RREMVDKAYEIATGMAGALERTLKILDPFLQPLVIQTGLSQYRSRYAS" gene 90732..91751 /gene="lpxK" /locus_tag="AT237_RS01330" /old_locus_tag="AT237_05125" CDS 90732..91751 /gene="lpxK" /locus_tag="AT237_RS01330" /old_locus_tag="AT237_05125" /EC_number="2.7.1.130" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_011180217.1" /GO_function="GO:0009029 - tetraacyldisaccharide 4'-kinase activity [Evidence IEA]" /GO_process="GO:0009245 - lipid A biosynthetic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="tetraacyldisaccharide 4'-kinase" /protein_id="WP_011180217.1" /translation="MHLSAPHFWWKNKSFLRFLLAPISWGYAYFSRRRMARHPPIVDL PVLCIGNFTCGGAGKTPVVIAFAKVAKELGFVPGVVSRGYGGRVKGIHLVNEEHDNAY DVGDEALLLARHAFVAISVDRYAAAQRLKKEGCNLILMDDGFQSRRLYMDYALLVVDA MRGFGNGAVFPAGPLRVPLKTQFSLMDSVLLIGDSDACDYIAFLVNRTGKSLHHAHLE SLASDKVAGKSFLAFAGIGNPDKFLKSIKELSGHVVQTYFYPDHYFFTNTDLKNLVQR AKMHNLWLATTAKDYIRIQTSKMQEDLKNLVVFDINVNFVQKNFCRVLLQEVMIRFRE RKHSL" gene complement(91796..92032) /locus_tag="AT237_RS01335" /old_locus_tag="AT237_05130" CDS complement(91796..92032) /locus_tag="AT237_RS01335" /old_locus_tag="AT237_05130" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_010704737.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="DUF2093 domain-containing protein" /protein_id="WP_011180218.1" /translation="MFSSNEREAKIHYSNNGYKIIEYGTYTLCAVSGQKILIDDLKYW NHHRQEAYASCEISYHRELECNPYLNQLLKAQKK" gene complement(92153..93991) /gene="mutL" /locus_tag="AT237_RS01340" /old_locus_tag="AT237_05135" CDS complement(92153..93991) /gene="mutL" /locus_tag="AT237_RS01340" /old_locus_tag="AT237_05135" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_011179069.1" /GO_component="GO:0032300 - mismatch repair complex [Evidence IEA]" /GO_function="GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]" /GO_process="GO:0006298 - mismatch repair [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="DNA mismatch repair endonuclease MutL" /protein_id="WP_011180219.1" /translation="MIIRHLSENIINQIAAGEVIERPANVVKELVENAIDAEATRIEI VTTNGGKNFIRVSDNGCGIPADQLTLAVSRHCTSKITDDVHNICFLGFRGEALPSIGS VAKLKLTSRTQNAESAAEIIVTAGKIVGPKPAAANPGTIVEVRDLFFVTPARLKFMKT DRAETNSITDMIKRIAIAFPHIHFSLSGSDRTSLELPATANNTQGQLQRITQIMGKEF APNSIVLNAERESVRLTGFACLPSFNRSNSLHQFAYVNGRPVRDKFLWGAIRGAYADV MTRDRYPVSILFIDLPPADVDVNVHPTKADVRFRDPGFIRGLIVGAIREALHHTGVRS TSTRSEAMLAAFQTQKPLKTFKSTYKPSSYSPQPYHVESASMVNKPLDIISPVGLKED APPLMEGLDIPSGDAYTPNTPAASEECSYPLGAARAQIHKNYIIAQTQDSLIIVDQHA AHERLVYEALKNALYSKPLPSQLLLIPEIVELSEEDATCLLTHKDALQKFGLGIEAFG PGAIVVRETPSLLGEINVEALIKDLADEAAEYDTTDNLKTMLDYVAATMACHGSIRSG RLLHPEEMNALLRQIEATPNTGTCNHGRPTYIELKLADIERLFGRK" gene 94289..95377 /locus_tag="AT237_RS01345" /old_locus_tag="AT237_05140" CDS 94289..95377 /locus_tag="AT237_RS01345" /old_locus_tag="AT237_05140" /EC_number="3.5.4.13" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_005866053.1" /GO_function="GO:0008829 - dCTP deaminase activity [Evidence IEA]" /GO_process="GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="2'-deoxycytidine 5'-triphosphate deaminase" /protein_id="WP_034447477.1" /translation="MARLSGILADSDIQALIDNNFLKALWPFDAAQIQPASLDLRLGE KAYRIRASFMPGADVRVLDKLERLKLHEFDLRDGAVLETGCVYIVPLLENLALPEILS AIANPKSSTGRLDIFTRVITDNAQEFDKICVGYHGPLYLEISPRTFPILVRTGSRLSQ LRFRKGHSYLNEIELHALHRDETLISDDLPNISAGGIGLSINLKGDENGLVGYRGKRH TSVIDIDKHAVANILDFWEPLFDRGQRELILDPDEFYILVSRESVHVPPLYAAEMTPF DPLVGEFRVHYAGFFDPGFGHMEAGGKGARAVLEVRSHEVPFILEHGQIIGRLVYEQM LKRPLALYGEDSGSHYQAQGLKLSKHFR" gene 96213..97364 /gene="lldD" /locus_tag="AT237_RS01350" /old_locus_tag="AT237_05145" CDS 96213..97364 /gene="lldD" /locus_tag="AT237_RS01350" /old_locus_tag="AT237_05145" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_012754680.1" /GO_function="GO:0010181 - FMN binding [Evidence IEA]; GO:0004457 - lactate dehydrogenase activity [Evidence IEA]" /GO_process="GO:0006089 - lactate metabolic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="FMN-dependent L-lactate dehydrogenase LldD" /protein_id="WP_011180221.1" /translation="MIISSTLDYRKAAKRRLPPFLFHYIDGGAYAEETMRRNYADLQA LALRQRILRGVGEVDLSTKLFDQTLDLPIILAPVGLTGMYARRGEVQAARAAVAKGIP FTLSSVSVCPIAEVQKAVGSAFWFQLYVLKDRGFMRDVLERSWASGVRTLVFTVDMPV PGARYRDAHSGMSGSYAGLRRILQAFIHPHWAWNVGIMGRPHDLGNVSTYLQKKIALD DYIGWLGANFDPSIGWHDLQWIRDFWKGKMILKGILDPEDAREAIQFGADGIVVSNHG GRQLDGVLSTVRALPAIAEAVKSDLTILVDSGVRSGLDVVRMIAQGADAVMIGRAFVY ALAAAGEKGVAHLIDLFANEMRVAMTLTGVRAIKEITRESLASPDVFEQ" gene complement(98507..98582) /locus_tag="AT237_RS01360" /old_locus_tag="AT237_05150" tRNA complement(98507..98582) /locus_tag="AT237_RS01360" /old_locus_tag="AT237_05150" /product="tRNA-Thr" /inference="COORDINATES: profile:tRNAscan-SE:2.0.12" /note="Derived by automated computational analysis using gene prediction method: tRNAscan-SE." /anticodon=(pos:complement(98547..98549),aa:Thr,seq:cgt) gene 99066..99207 /locus_tag="AT237_RS08925" /pseudo CDS 99066..99207 /locus_tag="AT237_RS08925" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_004864419.1" /note="frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology." /pseudo /codon_start=1 /transl_table=11 /product="SlyX protein" gene complement(99852..100172) /locus_tag="AT237_RS01365" CDS complement(99852..100172) /locus_tag="AT237_RS01365" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_011180223.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="WP_011180223.1" /translation="MLRPLLKLMAFIFIALTIIVLAIDSAHSVSTSHWTTTPLNTMLV NFLQTDIYGLNQSIRNIMPPFLSSICITLICLPGWSILGAVSIGFCLLNYKKPKPFHK ISYT" gene 100353..101780 /locus_tag="AT237_RS01370" /old_locus_tag="AT237_05155" CDS 100353..101780 /locus_tag="AT237_RS01370" /old_locus_tag="AT237_05155" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_005774073.1" /GO_component="GO:0016020 - membrane [Evidence IEA]" /GO_function="GO:0015171 - amino acid transmembrane transporter activity [Evidence IEA]" /GO_process="GO:0006865 - amino acid transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="amino acid permease" /protein_id="WP_011180224.1" /translation="MLNDANNELKRNLQNRHIQMIALGGVIGTGLFYGSKEAIQLAGP SAILAYLIGGLIIYFIMRMLGEMSVEEPSSGAFSFFAYKYWGRLAGFITGWNYWFLYI LVSMTELTVIGFYLDHWILIDHWKSSFIVLLLITLVNLFNVRFYGEFEFACALIKVAA VISMIIFGIFLIVTGVGGNQASIHYLWCHGGFFSYGAIGVVLATSVVMFSFGGTELIG IAAGETSNPQKTIPVAIRQVMWRIIIFYIGSISVIMIISPWNMIEKNSSPFVTIFETL GIPAAGHILNFVVIMAAISVYNSGIYSNGRMLYSLAIQKNAPYIFSKLSTARVPYIAI LFSSFCTAIIVVINALVPDNSFMRIMALATAAAVITWAIIIIVHLKFRKAHKNKKEDF MYAFGLYPYANYLCLCFLALLFCIMFVSGFGKNGLMTRLFDMIGIKMSFLETYIPMQM PDMSLAVVIIPLWCLFLFLGYKLKR" gene 101822..102502 /locus_tag="AT237_RS01375" /old_locus_tag="AT237_05160" CDS 101822..102502 /locus_tag="AT237_RS01375" /old_locus_tag="AT237_05160" /EC_number="3.6.3.-" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_004864424.1" /GO_function="GO:0005524 - ATP binding [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="energy-coupling factor ABC transporter ATP-binding protein" /protein_id="WP_011180225.1" /translation="MGIIKFDKVTQVFGDLYVLRNITVQLTERRIAVIGANGSGKSTF VRLINGLQLPSHGFVSVDGLDTKNDAKAIKHKVGFVFQNPDNQIVLPLVEEDLSFGLK NLKLSKEEVKERVDEILQRYDLQNFRNHAVHLLSGGQKQLVAISGVVAMKPDYIIFDE PTTLLDLRNKRLITQVIEELSQTAIVVSHDLEFIRNFDRVLVFDKGEIVVDDIPLVAI KEYIRRMS" gene 102499..103137 /locus_tag="AT237_RS01380" /old_locus_tag="AT237_05165" CDS 102499..103137 /locus_tag="AT237_RS01380" /old_locus_tag="AT237_05165" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_011179076.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="energy-coupling factor transporter transmembrane component T family protein" /protein_id="WP_011180226.1" /translation="MIGLYIPRDTFIHNLKPGIKLLFLTVCGTTILMVSSIPILVLLL LFVILFYKIAKIPFGTVIKQFKSMGLFLALIFVFQAIFVNWLIGIEVILHLIILFSLS SLVSFTTRVSDMVASIEVGLQPFRRFGINPSQLSMVISMSIRFIPLLSEKFNEVREAQ RARGFNTNIATLAIPLIIRTIRMASEVAEALEARSYNADTVDTIASDNINLS" gene 103151..103705 /locus_tag="AT237_RS01385" /old_locus_tag="AT237_05170" CDS 103151..103705 /locus_tag="AT237_RS01385" /old_locus_tag="AT237_05170" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_006589142.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="biotin transporter BioY" /protein_id="WP_011180227.1" /translation="MNTKDLTYIALFAAIYAVLSFFPPISLPFLLGVPITAQSMGPML AGSILGAKRGALASLLFLVLVAIGLPLLPGGRGGIGVFSGASGGYLIGFPFAAFFIGF MVELFWQRLNFITLIVINALGGIGVVYAFGIPWTAYITKISLLKVLVASSGFLIGGCL KVLIASFVALTVKKSVPLISSKEE" gene 104275..104517 /locus_tag="AT237_RS01390" /old_locus_tag="AT237_05175" CDS 104275..104517 /locus_tag="AT237_RS01390" /old_locus_tag="AT237_05175" /inference="COORDINATES: ab initio prediction:GeneMarkS-2+" /note="Derived by automated computational analysis using gene prediction method: GeneMarkS-2+." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="WP_049784541.1" /translation="MNIKFFFVVCTIFSCLSSFVKETDRIVLQEEIPVIITYNFSKKD LFFGEQVNPLLNKFILPTHPGNHTVFWKNVAFFFRK" gene 107741..108184 /locus_tag="AT237_RS01410" /old_locus_tag="AT237_05185" CDS 107741..108184 /locus_tag="AT237_RS01410" /old_locus_tag="AT237_05185" /inference="COORDINATES: ab initio prediction:GeneMarkS-2+" /note="Derived by automated computational analysis using gene prediction method: GeneMarkS-2+." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="WP_038525120.1" /translation="MNKEAHKNGDGKTRIEFIPSLALIRNGGRGGHDASGNWSSRGSW GAVVVIGGTSVYGGGGGGGFGGSGNDGKNGRAVNGTGGRGGNSILAVAVEEVATIVEW VKARGEIVCGLAKVVMVVTAVAVDISLVKMQQPHQAAMAVTEQYL" gene 108213..108877 /locus_tag="AT237_RS01420" /old_locus_tag="AT237_05190" /pseudo CDS 108213..108877 /locus_tag="AT237_RS01420" /old_locus_tag="AT237_05190" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_011180808.1" /note="frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology." /pseudo /codon_start=1 /transl_table=11 /product="lysozyme" gene 108874..109101 /locus_tag="AT237_RS01425" /old_locus_tag="AT237_05195" CDS 108874..109101 /locus_tag="AT237_RS01425" /old_locus_tag="AT237_05195" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_006589772.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="WP_034447472.1" /translation="MILWMKKNLMLTGAVLAAFFIVLAKAFTLGKKAEQQKQTENILK TITARFEVENEVNKKTDVDVRVALSDWLRDP" gene 109233..109451 /locus_tag="AT237_RS01435" /old_locus_tag="AT237_05200" CDS 109233..109451 /locus_tag="AT237_RS01435" /old_locus_tag="AT237_05200" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_007346742.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="WP_034447468.1" /translation="MVRKKAEKHTELTEAEKVMLQEMIITYQSVKVMSSFMKWSAFFL FLLILDFARLIDAIDDVIAHLKQLFSKN" gene 109585..109955 /locus_tag="AT237_RS01440" /old_locus_tag="AT237_05205" /pseudo CDS 109585..109955 /locus_tag="AT237_RS01440" /old_locus_tag="AT237_05205" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_006589484.1" /note="frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology." /pseudo /codon_start=1 /transl_table=11 /product="XRE family transcriptional regulator" gene 110262..111419 /locus_tag="AT237_RS01445" /old_locus_tag="AT237_05210" CDS 110262..111419 /locus_tag="AT237_RS01445" /old_locus_tag="AT237_05210" /EC_number="2.7.7.-" /EC_number="3.1.-.-" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_012231031.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="tyrosine-type recombinase/integrase" /protein_id="WP_011180232.1" /translation="MRGIHRLSALLVKSASQGKYCDGAGLWLNVRKDNTRSWFFRYTY HNKRREMGLGPVAQLSLKEARELAKHYSAILREGNDPIVFREQTVLKQQSNIFSEIAT AAFESKKAELKNEGKNGRWFSPLELHVIPHIGSLSIEKLTANIIRNVLAPLWHEKADT ARKALNRINICLKYAAALGLDVDLQACMKARALLGKPRATSTNIPAMPWQEVPAFYQS LDDKILSNLALKLLILTGVRSYPLRYLRLEQIDKDIWTIPKENMKGIVGKVSDFRVPL SHEALKMIEKSLPFEKNGFLFAGSSGKPISDVTLSKFMKDKGFDYRPHGFRSSLRDWI AETTSTPFEIAETVLAHSVGSSVTKAYMRTDFLEQRHTLMEQWAAFITGAT" gene 111442..111663 /locus_tag="AT237_RS01450" CDS 111442..111663 /locus_tag="AT237_RS01450" /inference="COORDINATES: ab initio prediction:GeneMarkS-2+" /note="Derived by automated computational analysis using gene prediction method: GeneMarkS-2+." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="WP_236087011.1" /translation="MSNQVPKKHLESIADRLPKQSFLRALKTLTRCMRVAYKGFVGCS YAIQYPYGESIATDYRPCFLAPGIPLECQ" gene 111691..112281 /locus_tag="AT237_RS01455" /old_locus_tag="AT237_05215" CDS 111691..112281 /locus_tag="AT237_RS01455" /old_locus_tag="AT237_05215" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_012230746.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="antA/AntB antirepressor family protein" /protein_id="WP_011180234.1" /translation="MNTLIKITEQTIDQEAVQTVNARELHTFLEVKSNFRDWIKNRIE DYGFLENKDFISFAKILAKPNAPQENQDFMSFTQKRVKPKSGRPSIEYHLTLDMAKEL SMVERNEKGRQARRYFIECEKKLKSQSVEYDVDRRFDLPSHWEGMNAGEKALYLLGPI HVRLIDAFRVDEENRKYKALIKEAKQVLATSVTKAA" gene 112401..112676 /locus_tag="AT237_RS01460" /old_locus_tag="AT237_05220" CDS 112401..112676 /locus_tag="AT237_RS01460" /old_locus_tag="AT237_05220" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_011180235.1" /GO_process="GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="type II toxin-antitoxin system RelB/DinJ family antitoxin" /protein_id="WP_011180235.1" /translation="MGKIQARIPDEVQEVASAVIKSTGLTVSDAVRMFMTRIARDRAL PLDLFQPNLETLQAIEDAEMGRVERTSLDGLRAMIRDDKAEVCKSAK" gene 112689..112979 /locus_tag="AT237_RS01465" /old_locus_tag="AT237_05225" CDS 112689..112979 /locus_tag="AT237_RS01465" /old_locus_tag="AT237_05225" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_005774062.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="type II toxin-antitoxin system YafQ family toxin" /protein_id="WP_011180236.1" /translation="MREIVYTKSFRCDLKRESKGRYADTLETEETDLLLVIKALAENE LLKVQWRDHALTGQWRNCRDCHIKPDLVLIYRKPDDETLELLRLGSHSELRL" gene complement(113102..113314) /locus_tag="AT237_RS01470" /old_locus_tag="AT237_05230" CDS complement(113102..113314) /locus_tag="AT237_RS01470" /old_locus_tag="AT237_05230" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_007347396.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="WP_034447463.1" /translation="MARKKTQDDIELTEGEKEILQEIIMTYKSIKVMSRYTKWIVLII LLLALDFSRLIDAVGNIFTQKPNIRL" gene complement(113307..113510) /locus_tag="AT237_RS08935" CDS complement(113307..113510) /locus_tag="AT237_RS08935" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_005775011.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="WP_034447462.1" /translation="MKLIRKVILMCVLLSLVGCGTNKYVSCVGWLPIYLERQDVDVIS SNLAREILKHNKQGERVCGWKHG" gene complement(113443..113670) /locus_tag="AT237_RS01480" /old_locus_tag="AT237_05235" CDS complement(113443..113670) /locus_tag="AT237_RS01480" /old_locus_tag="AT237_05235" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_007552683.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="WP_011180238.1" /translation="MILWMKRNLLLTGAALAAFFMALAKAFTLGKKAEQQKQKEKTLK AATTRLEVENEVNQKSDTDVRAALSRWLRNK" gene complement(113667..114329) /locus_tag="AT237_RS01485" /old_locus_tag="AT237_05240" CDS complement(113667..114329) /locus_tag="AT237_RS01485" /old_locus_tag="AT237_05240" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_007552684.1" /GO_function="GO:0003796 - lysozyme activity [Evidence IEA]" /GO_process="GO:0016998 - cell wall macromolecule catabolic process [Evidence IEA]; GO:0009253 - peptidoglycan catabolic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="lysozyme" /protein_id="WP_011180239.1" /translation="MRTISQEGLALIKQWEGLRLNAYKDAIGVWTIGYGHTNNAGKPF VYKGMAITEKQAEELLCQDLRQFENTVEQAVQVSLTDEQFAALVSFCYNVGTTAFCNS TLLRKLNSGDYEAIPTELQKWTKAGGKRLQGLVHRRAAEAGLWAKGAFVSSNYQTVET QAPTGLFKAEALAPVIGSFSGLGGLLAGNGPVQWALATIMVLAACAGIFFVAKRFQEH RL" gene 114489..114791 /locus_tag="AT237_RS01490" /old_locus_tag="AT237_05245" CDS 114489..114791 /locus_tag="AT237_RS01490" /old_locus_tag="AT237_05245" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_004858845.1" /GO_function="GO:0004540 - RNA nuclease activity [Evidence IEA]" /GO_process="GO:0008219 - cell death [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="type II toxin-antitoxin system RelE/ParE family toxin" /protein_id="WP_011180240.1" /translation="MFTIYKTEHFIKWLDSLKDEIAQAHIVKRIARIETGFLGNVKFF RGIGELKIHHGPGYRIYFVKQGKQIILLLNAGDKSTQQKDIEKALQLVKEMKHGNY" gene 114778..115098 /locus_tag="AT237_RS01495" /old_locus_tag="AT237_05250" CDS 114778..115098 /locus_tag="AT237_RS01495" /old_locus_tag="AT237_05250" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_007552686.1" /GO_function="GO:0003677 - DNA binding [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="addiction module antidote protein" /protein_id="WP_011180241.1" /translation="MEITKFDTSEYFKTPETQRILLEDALESKDSKYLAHALGIIAKN QGMSKIAQNTGLSRESLYRSLSDKGDPRLSTFLSVLSALDLQMSLTPIQKNCKEQKAL EEAS" CONTIG join(LNZX01000005.1:1..115160) //
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