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Klebsiella pneumoniae strain EuSCAPE_PT005, whole genome shotgun sequence

NCBI Reference Sequence: NZ_UIZG01000031.1

FASTA Graphics 

LOCUS       NZ_UIZG01000031        47711 bp    DNA     linear   CON 22-NOV-2024
DEFINITION  Klebsiella pneumoniae strain EuSCAPE_PT005, whole genome shotgun
            sequence.
ACCESSION   NZ_UIZG01000031 NZ_UIZG01000000
VERSION     NZ_UIZG01000031.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA3649824
            Assembly: GCF_900502665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group;
            Klebsiella; Klebsiella pneumoniae complex.
REFERENCE   1
  CONSRTM   Pathogen Informatics
  TITLE     Direct Submission
  JOURNAL   Submitted (07-AUG-2018) WTSI, Pathogen Informatics, Wellcome Trust
            Sanger Institute, CB10 1SA, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            UIZG01000031.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900502665.1-RS_2024_11_19
            Annotation Date                   :: 11/19/2024 10:11:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.9
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,640
            CDSs (total)                      :: 5,537
            Genes (coding)                    :: 5,370
            CDSs (with protein)               :: 5,370
            Genes (RNA)                       :: 103
            rRNAs                             :: 5, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 167
            CDSs (without protein)            :: 167
            Pseudo Genes (ambiguous residues) :: 0 of 167
            Pseudo Genes (frameshifted)       :: 54 of 167
            Pseudo Genes (incomplete)         :: 118 of 167
            Pseudo Genes (internal stop)      :: 17 of 167
            Pseudo Genes (multiple problems)  :: 19 of 167
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..47711
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="EuSCAPE_PT005"
                     /serovar="not available"
                     /db_xref="taxon:573"
                     /note="contig: 18623_274SCcontig000031"
     gene            <1..1260
                     /gene="traB"
                     /locus_tag="D2Z99_RS25750"
                     /old_locus_tag="SAMEA3649824_04844"
     CDS             <1..1260
                     /gene="traB"
                     /locus_tag="D2Z99_RS25750"
                     /old_locus_tag="SAMEA3649824_04844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F-type conjugal transfer pilus assembly protein
                     TraB"
                     /protein_id="WP_116954364.1"
                     /translation="GVVDSSFNSKVEQHATTEMQATAADLNKRFDSLQGEVDLLSKAR
                     TADQIRIDKLSSDNEAMQTQLKALGVKPAVSGGEPAPTPPSPPPGPEGEPQPASYPPQ
                     TGAAVPPPTAFYPGNGMTPPPQVSYQSVPVPNQIQRKTFSYDKGKKTKSLPYIPSGSF
                     AKSMLIEGADANASVTGNESTVPMQLRITGRVEMPNSKTYDLTGCFVGLEAWGDVSSE
                     RAIVRTRNISCIKGDKTIDQPINGHVSFMGKNGVKGEVVMRNGKILGWAWGAGFVDGI
                     GQGMERASQPAVGLGATASVGAGDVLKMGVGGGASKAAQTLSEYYIKRAEQYHPVIPI
                     GAGNEVTVVFQDGFQLKTIEELEAEKNGQQQAQNQEAGPAPQADAHHQSGGGMNGFNT
                     DEMLKKLGKLDPREFSPGAAPQGENNG"
     gene            1374..1958
                     /gene="traV"
                     /locus_tag="D2Z99_RS25755"
                     /old_locus_tag="SAMEA3649824_04845"
     CDS             1374..1958
                     /gene="traV"
                     /locus_tag="D2Z99_RS25755"
                     /old_locus_tag="SAMEA3649824_04845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV conjugative transfer system lipoprotein
                     TraV"
                     /protein_id="WP_004161368.1"
                     /translation="MKELMLLIPLGGALLLTGCAGTETEFQCNATTSDTCMTMEQANE
                     KAKLKEERSDAKPAAAGLPQLAEGNFRTTSVNSYPLPPQSNLTQARVAAEKDRARAVY
                     LNNPTAKNEATYFETEKRLQSLPVVKMSLPVVASTFTSPSTPPGNYPRPLRKGEETTS
                     LWIAPYVDSDDVYHQPATVLFVVKPSAWGQPRLN"
     gene            2090..2500
                     /locus_tag="D2Z99_RS25760"
                     /old_locus_tag="SAMEA3649824_04846"
     CDS             2090..2500
                     /locus_tag="D2Z99_RS25760"
                     /old_locus_tag="SAMEA3649824_04846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004152597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_004152499.1"
                     /translation="MTESIKYLWMLLCEESSYIFMLMLIVGTAAVMSFFLQRLFVSWW
                     GKAIILIMCIVVAITEVFVFIEPESTYKQIQTNKQDVIYTLKNCRVSAFEAQQAGFLA
                     KAKDAWSCPDGVTRYMDVKYRDKTAVNKLRTEGK"
     gene            2606..2824
                     /locus_tag="D2Z99_RS25765"
                     /old_locus_tag="SAMEA3649824_04847"
     CDS             2606..2824
                     /locus_tag="D2Z99_RS25765"
                     /old_locus_tag="SAMEA3649824_04847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_004152501.1"
                     /translation="MHAFIFLVLMTPSSGGGIWDITPMPNTDVCIKMLRVLEERGGRG
                     YGSNTGECIEIKTREPLSSVMETLSEGG"
     gene            2825..3136
                     /locus_tag="D2Z99_RS25770"
                     /old_locus_tag="SAMEA3649824_04848"
     CDS             2825..3136
                     /locus_tag="D2Z99_RS25770"
                     /old_locus_tag="SAMEA3649824_04848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_004152502.1"
                     /translation="MAEYQLSFDGFVRLFFAMAIIICGYGYIVMSIFVKDTLTHILML
                     LGLVGFSAFFSFVVFKDKSMWSGSPDLTLSVITGFFTATVIFYMFYVLIYSFCRMGEG
                     E"
     gene            3203..3607
                     /locus_tag="D2Z99_RS25775"
                     /old_locus_tag="SAMEA3649824_04849"
     CDS             3203..3607
                     /locus_tag="D2Z99_RS25775"
                     /old_locus_tag="SAMEA3649824_04849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_004152503.1"
                     /translation="MKAYYILGHNVAWLNGICLILFVIGVVGAMAMVAIPEKFNLRVN
                     RGDTFIYCALIAVVGFSGMFVISIHSFSMDELEAGRHWKDDCRTLEVNMPTGAFTSPV
                     NKLDCDGIIINVPGGQYYSYIHQWELYKANSK"
     gene            3650..4039
                     /locus_tag="D2Z99_RS25780"
     CDS             3650..4039
                     /locus_tag="D2Z99_RS25780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004144413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_004153076.1"
                     /translation="MERQQEIEERSRDLIIKADEKERQELKRFDLPYGIFLILLFFWL
                     AGYFFVQYEDFRDMQPATPEQLQSIIHDAPCAGEAFRMALQTNTVTSSATLTFGDAKK
                     MASECKDKEEIKAVREKQLNALNDMSK"
     gene            4047..4445
                     /locus_tag="D2Z99_RS25785"
                     /old_locus_tag="SAMEA3649824_04850"
     CDS             4047..4445
                     /locus_tag="D2Z99_RS25785"
                     /old_locus_tag="SAMEA3649824_04850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_011977783.1"
                     /translation="MDMMLFLRKYGFLFIPPVYWLIYLGARLTYNGLTGEFSADFLQG
                     IRHEGVYIICSLCVFYFFCLEVEVGDGEFSANILFLIVFFHVVLLFITLLICLWQGEV
                     LLDSIFMGQIIASMCLLFFIPVLSIIRRRF"
     gene            4517..7156
                     /gene="traC"
                     /locus_tag="D2Z99_RS25790"
                     /old_locus_tag="SAMEA3649824_04851"
     CDS             4517..7156
                     /gene="traC"
                     /locus_tag="D2Z99_RS25790"
                     /old_locus_tag="SAMEA3649824_04851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion system protein TraC"
                     /protein_id="WP_022644936.1"
                     /translation="MSNNIIDAVTQAVNSLVSALKLPDESAKANDTLGSMNFPQFSRI
                     LPYKDYDSATGLFINNKTIGFMFEARPLPGADKSIVATLEHLLRSKLPRGVPVSFHLV
                     SSKLVGNDIDYGLREFRWSGKQAKKFNAITQAYYLRAAETKFPLPPALDLPLTLRNYR
                     VYISCCVPRKKNSTTQIVEMENQIKILRASLGGAYIPTRILDAAGLVELMRELINPDP
                     HEMYRVPYKLDPYQDLNYQCVDDSFDMQVTAGHLKIGRLGRDGKECVTRVTSYHLESD
                     PEMAFLWTSADNYANLLNPELSISCPFVITLTLMVEDQVKTQNEANMKFMDVEKKSKT
                     SYAKFFPNVIKEMQEWGDIRQRLATNQTSLVSYFFNITTYTADSTEASLAAEQQVLNS
                     YRKGGFQLIPARYHHLRNFLAMMPFKCGEGLFKELQAAGVVKRAETFQVANLLPIVAD
                     SPLAPAGLLAPTYRNQLAFIDLFYEGMNNTNFNMAVCGTSGAGKTGLIQPLIRSVLDS
                     GGFAWVFDMGDGYKSLCENMGGVYLDGDTLKFNPFANVLDDAHFDMSAERIRDQMSVM
                     ASPNGNLDEVHEGLLLQAVQAAWLSKRNHARVDDVVQFLQDAKDSDEYADSPTIRGRL
                     DEMIILLDQYTVNGIYGDYFNSDTPTLHDDARMVVLELGGLESRPSLLIAVMFSLIIY
                     IENRMYQSPRGLKKLNVIDEGWKLLDFKNEKVGQFIEKGYRTARRHTGAYITITQNIV
                     DFDSPTASSAARAAWGNSSYKAILKQSAKEFAKYNQLYPDQFSKLEKDMINGFGSAKE
                     QWFSSFMLQVEANCSWHRLFVDPLSRAMYSSKGPDFEYMKARREEGVDIHDAVYGLAC
                     RNFKDEMAELESRIPVNDIEDKQ"
     gene            7156..7548
                     /gene="trbI"
                     /locus_tag="D2Z99_RS25795"
                     /old_locus_tag="SAMEA3649824_04852"
     CDS             7156..7548
                     /gene="trbI"
                     /locus_tag="D2Z99_RS25795"
                     /old_locus_tag="SAMEA3649824_04852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004144410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system protein TrbI"
                     /protein_id="WP_022644935.1"
                     /translation="MKNNTEQPVSTTSHTFRRIPVIVALVLFALATSAFLSRVVLEYS
                     TPRVVAFDMKKTLDSFMDSVSQKQLTEAQSKALSDRFNDALEKSLAEYQQQHHVVILV
                     SPAVVQGAPDVTRNIQHDIARRMKGEQS"
     gene            7545..8180
                     /gene="traW"
                     /locus_tag="D2Z99_RS25800"
                     /old_locus_tag="SAMEA3649824_04853"
     CDS             7545..8180
                     /gene="traW"
                     /locus_tag="D2Z99_RS25800"
                     /old_locus_tag="SAMEA3649824_04853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system protein TraW"
                     /protein_id="WP_020325113.1"
                     /translation="MIRLKDCLLAACLLSPLTQAADLGTWGDLWPVREQDMLQLITQR
                     LQSLQSSGQWDQTMDAFKQRVIENSQRPAPVEGIKRAEKYEQRWFDPSIRLTEDLKDN
                     EGRVFARKGEVVNPLKTVPFVQTLYFINGDDADQLAWMKRQVPETLMSKIILVRGSIP
                     DTSAALDSRIYFDQNGVLSKRFGLTAVPARITPAPSGERLNIETFPPVPHP"
     gene            8215..8616
                     /locus_tag="D2Z99_RS25805"
                     /old_locus_tag="SAMEA3649824_04854"
     CDS             8215..8616
                     /locus_tag="D2Z99_RS25805"
                     /old_locus_tag="SAMEA3649824_04854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_022644934.1"
                     /translation="MPMILALIILLTMLLLTLMWSTIRKQENVIRELSTRESWLEREV
                     ERLRTDNEKLYRWLRYNGEKVIDEMTCELDALSAVRQTNRDSYRRQLYLFDCLSLMVW
                     AGMEGAEDSTREKVRNKTDALRLVLREKTDK"
     gene            8613..9602
                     /gene="traU"
                     /locus_tag="D2Z99_RS25810"
                     /old_locus_tag="SAMEA3649824_04855"
     CDS             8613..9602
                     /gene="traU"
                     /locus_tag="D2Z99_RS25810"
                     /old_locus_tag="SAMEA3649824_04855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer pilus assembly protein TraU"
                     /protein_id="WP_015632509.1"
                     /translation="MKAMFFLICIAFSTFSGRAAADPSCEGRFVNPITDVCWRCIFPL
                     SLGSVQVGKGDLPDTSNPGSPLQLCPAPPPLFVRPGLAIGYWEPMAMTDVSRSPGCMV
                     NLGGFSINLGKTGMGTARKDDKQVNGAFYHVHWYKYPLTYWLNIITSAGCLEGGDMDI
                     AYLSEIDPTWVDSSLTTILNPEAILFANPIAQGACAADALASAFHMPLDVLFWCGGSH
                     GSLYPFNGQVSNESSPLQSSVLVSERMAFKLHRQGQIMESIGKDKAVCYEYPSPIIPK
                     ERWRYQMVNMYPDSGQCHPLGRSVMRWEAGKNPPNTRKNYGYLMWRKRNCVFL"
     gene            9615..10253
                     /gene="trbC"
                     /locus_tag="D2Z99_RS25815"
                     /old_locus_tag="SAMEA3649824_04856"
     CDS             9615..10253
                     /gene="trbC"
                     /locus_tag="D2Z99_RS25815"
                     /old_locus_tag="SAMEA3649824_04856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system pilin
                     assembly protein TrbC"
                     /protein_id="WP_022644933.1"
                     /translation="MKLMNLFMVMLLLNGRAVLAETSSVTDREWLKQQENLSEQLRQH
                     PDKQLQQELEAQISRNPLPKSDRQFIDNLVSQQKAANQEKPSEGALYFVSFSIPEEGL
                     KRMLHETRQYGIPATLRGLVNNDMRTTTDAVLQLVKDGVTDGVQIDPTLYTQYGIRSV
                     PSLVVRCQAGYDVVRGNIHVKQALEKVAQTGDCAQLARQILDAHSNAAGSQP"
     gene            10312..12267
                     /gene="traN"
                     /locus_tag="D2Z99_RS25820"
                     /old_locus_tag="SAMEA3649824_04857"
     CDS             10312..12267
                     /gene="traN"
                     /locus_tag="D2Z99_RS25820"
                     /old_locus_tag="SAMEA3649824_04857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system mating-pair
                     stabilization protein TraN"
                     /protein_id="WP_022644932.1"
                     /translation="MKTVISVLTAHFLVLSAFIWLASPACADSGSDYKAGSDFAKQVQ
                     GNGLNSLKNFSGEQNLPGYTDNPDQTKYYGGVTASGDSSLKSDSALEFSQGDTGKAIT
                     ESFTNRPPDQISQDAPFIQAAKDTESRADSIVGDTGQSCTAQVVNRSEFTNHTCERDL
                     QVENFCTREATLKDNATTQKVNRTYQQVVTLNYARSTRQWSGNLTIPTNGRLLNASVD
                     GEPLVIPWIEECDSEGKVRDSCKSAVSESLTLFERTFPIDVINWPRSESMCSGGQNTH
                     CTKYTYDGKGKIHQSFGVDKAVTAGQNFSVSKTSRTVSSASQKPVQVTVTLVMEETET
                     VYAPEVVWVESCPFSKDEGKKTGEECISPGGTRTITLGGRDYSFTEACWKYKDTWLTQ
                     PADNGSCESLMKNTACTLSSRQCAFSSEEGTCLHEYATYSCETRTSGKQMICGGDVFC
                     LDGECDKATSGKSNDFGQAVSELAALAAAGKDVAALNGVDVRAFTGKAKFCKKFAAGF
                     SNCCKDSGWGQDVGLARCSSEEKALAKAKKDKLTVSIGEFCSKKVLGICLEKKRSYCQ
                     FDSKLAQIVQQQGRNGQLHIGFGGASSPDCRGITVAELQGIDFNKLDFTNFMDDLMKN
                     QKIPENDVLTNKTRERIKEIMSQQSAQ"
     gene            12299..12553
                     /locus_tag="D2Z99_RS25825"
                     /old_locus_tag="SAMEA3649824_04858"
     CDS             12299..12553
                     /locus_tag="D2Z99_RS25825"
                     /old_locus_tag="SAMEA3649824_04858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbE"
                     /protein_id="WP_004152674.1"
                     /translation="MKMSFHKKPVIDFVLRLTLTIIIISPVIYFSWDAVKGTSGSDYV
                     ESVVFILMAGFAMSVCYLFFSVLEKVINARKSKDESIYHD"
     gene            12531..12779
                     /locus_tag="D2Z99_RS25830"
                     /old_locus_tag="SAMEA3649824_04859"
     CDS             12531..12779
                     /locus_tag="D2Z99_RS25830"
                     /old_locus_tag="SAMEA3649824_04859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_022644931.1"
                     /translation="MNRYITIEKFIDILNEENLPQEHHVMVLAVLADISLHTDRFLIN
                     SSELVQMAAQYSPAFQKLPADRQAFISSVLSMPPFLIM"
     gene            12792..13118
                     /locus_tag="D2Z99_RS25835"
                     /old_locus_tag="SAMEA3649824_04860"
     CDS             12792..13118
                     /locus_tag="D2Z99_RS25835"
                     /old_locus_tag="SAMEA3649824_04860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_004152676.1"
                     /translation="MEEKKAYGLVMVFVGVFVFLLVSIMSYSLWRDRQVNAFMTTNRA
                     WGIQCDTVSQAAWVIRDGERVDLQINYLPLYCSGYRFEARDDAGKVQRQLDKYSVYQH
                     LSRQSH"
     gene            13139..13891
                     /gene="traF"
                     /locus_tag="D2Z99_RS25840"
                     /old_locus_tag="SAMEA3649824_04861"
     CDS             13139..13891
                     /gene="traF"
                     /locus_tag="D2Z99_RS25840"
                     /old_locus_tag="SAMEA3649824_04861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system pilin
                     assembly protein TraF"
                     /protein_id="WP_004152677.1"
                     /translation="MRTIHAAMLAGCLCCALMPAFAKDAGWQWYNEKLKPRDEDRKAV
                     PAAPPPQMDILEKLATLQAATKRSLYEAILYPSSENFVKYFRLQNYWTQQAGLFSMSA
                     KKAMLENPELDYNLQYSHYNGTVKNQLAADYAEQRQAISTLAQHYGVMFFYRGREAID
                     GQLVQVIKNFRETYGLSVIPVSVDGVINPMLPDSRTDQGQAEQLGVKFFPAMMLVNPK
                     SGQVKPLSYGFISQDDLAKQFLYVSSDFKPNF"
     gene            13902..14141
                     /gene="traQ"
                     /locus_tag="D2Z99_RS25845"
                     /old_locus_tag="SAMEA3649824_04862"
     CDS             13902..14141
                     /gene="traQ"
                     /locus_tag="D2Z99_RS25845"
                     /old_locus_tag="SAMEA3649824_04862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system pilin
                     chaperone TraQ"
                     /protein_id="WP_004144400.1"
                     /translation="MRNIRFPDLDITGMWVLAVGVFFHLIARLVRKQPELAVQAGEIF
                     GLGMVVFGGYRILNALIAEAEKEEKACEKQPDEPR"
     gene            14113..14670
                     /gene="trbB"
                     /locus_tag="D2Z99_RS25850"
                     /old_locus_tag="SAMEA3649824_04863"
     CDS             14113..14670
                     /gene="trbB"
                     /locus_tag="D2Z99_RS25850"
                     /old_locus_tag="SAMEA3649824_04863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system pilin
                     assembly thiol-disulfide isomerase TrbB"
                     /protein_id="WP_022644930.1"
                     /translation="MKNSLMNLAKTPLAALALSLALAGMAQAGTLDEVKSLWDPRGIS
                     GTETASPQSDTPQAVSGASQPRWLRLSNGKQVDLRDWKVVLFMQGHCPYCHKFDPVLK
                     QLAGQYGFSVFSYTIDGQGDDAFPEALPAPPDVMQTFFPNIPVATPTTFLVNVNTLAA
                     YPILQGATDAQGFMARVDTVFQMMH"
     gene            14716..15159
                     /gene="trbF"
                     /locus_tag="D2Z99_RS25855"
                     /old_locus_tag="SAMEA3649824_04864"
     CDS             14716..15159
                     /gene="trbF"
                     /locus_tag="D2Z99_RS25855"
                     /old_locus_tag="SAMEA3649824_04864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F-type conjugal transfer protein TrbF"
                     /protein_id="WP_004194305.1"
                     /translation="MNKYIRSTGLYAFLFPASLKDSGQTAAEKIEQLKPEFIHRERRL
                     EIYLELFIVFLTAGALLLWIMRFLFNLCVDDWIASGDLRVKDLWNIMMYAIPYALIAV
                     GVGFFVAGVTLAIRNFFSYHLKTLFILRNDRVKKNAVRNGGQDAN"
     gene            15137..16516
                     /gene="traH"
                     /locus_tag="D2Z99_RS25860"
                     /old_locus_tag="SAMEA3649824_04865"
     CDS             15137..16516
                     /gene="traH"
                     /locus_tag="D2Z99_RS25860"
                     /old_locus_tag="SAMEA3649824_04865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer pilus assembly protein TraH"
                     /protein_id="WP_075995129.1"
                     /translation="MEDRMRIKLLSLFCGAALGLSFSAAADVNGDMNNFFNKLGFASN
                     TSQPQVWQGQAAGYASGGSLYARTQVKTIQLVSMTLPDINAGCGGIDAYLGSFSFINS
                     EQLQRFGKQIMSNAAGYFFDLALQTTVPEIKTAKDFLQKMATDMNSMNLSSCQAAQGI
                     VGGLFPRTQVAQQKVCQDIAGESNIFSDWAASRQGCTVGGKMDSVQDKASDKDKERVM
                     KNINIMWNALSKNRLFDGNKELKEFIMTLTGTLIFGENSEITPLPARTTDQDLIRAMM
                     EGGTAKIYHCNDSDKCLKVVADATVTITSSKALKSQISALLSSIQNKAVADEKLTDQE
                     KGFISSTTIPVFKYLVDPQMLGVSNSLIYQLTDYIGYDILLQYIQELIQQARAMISTG
                     NYPQSTMDMIMENLNQASVQIAAFQSRVQVQQDALLVVDRQMSYMRQQVSARMMTRYQ
                     NNYHFGGNL"
     gene            16516..19365
                     /gene="traG"
                     /locus_tag="D2Z99_RS25865"
                     /old_locus_tag="SAMEA3649824_04866"
     CDS             16516..19365
                     /gene="traG"
                     /locus_tag="D2Z99_RS25865"
                     /old_locus_tag="SAMEA3649824_04866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020326930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer mating-pair stabilization
                     protein TraG"
                     /protein_id="WP_004152624.1"
                     /translation="MLEIYAIAGGDWLRGNLNAIAAFMGTSTWSTIEKMCIAISVLIV
                     AGNWVKKHNVMDLIGWVFSLTLVSMLVVIRTPVQIIDYSNVAQVYEVDNVPIGLAIPA
                     SLTTRVGNALIQSYEMVFALPDSVTYSKTGMLFGSNLVAKSTDFLSQNPQITTLFSDY
                     VQNCVMGDIFLNHKYSFEELLNSPDPYTLIFANPSPLRGVFDKNNQFQTCEEASRDLK
                     SALALDTQTGGKTWNYYVRQLFGGKPNPDLLFSQMIGDSYNYFYSSGQSAGQIIRQNV
                     TMNALRSGIQSYAARSGDTASLVNIANTSSLEKQRLAQATMGHQALRTLPLMQTVIMG
                     IMIGMFPIMVMAAMFNMMTLQVLKGYVFALIWLQTWPLLFAILNSAMAYYAKQNGVPV
                     VLSELSQVQLKNSDIATTAGYIAVMIPPLSWGIVKSMGAAFSSAYSHFSSSGLGATSQ
                     AASGVVDGNYSFANMQMENVSGYSWGTNSTTSFGQMSRQLANGGMSTQTRDGSMVWDS
                     GGAMSKLPVDINVGRQIASAQQQMAREADVQAESALHGYNSSVTSAWNVLKQFGTNRG
                     TSSSMTTGADNTESSQDTMAKSKMWNAVVANAKANNISNEQSFQNLMDESTRGTVTGE
                     AHVGARWSSGDQLAGKIGKLATGASVEGGIKGSISGSGSTGSTDTVGQSGRHSSDSRH
                     DISSQAAKDFREASDYLVSHKTNTSGNITDNNASSRVDQFAASLSSAKNSYDQYTTSR
                     TRSHEYSEMASRTESLTGQMSENLTQQFANFVQHRAPQDAEAILTNTSSPEIAAQREM
                     LAREFVKAQVEPRIDSSFEQGRNDIGNGMASVSGTPGDQTVVSDFGKHSGDIESMSRN
                     SGIKENVRNQVDSMVEDNTRINNAGKINIKEQGEGIKQQNADFEMLHKKEGNDFNERY
                     NKELNGQVNNPLSNTTEEFRKKAEESARKMDGKLP"
     gene            19378..19926
                     /gene="traS"
                     /locus_tag="D2Z99_RS25870"
                     /old_locus_tag="SAMEA3649824_04867"
     CDS             19378..19926
                     /gene="traS"
                     /locus_tag="D2Z99_RS25870"
                     /old_locus_tag="SAMEA3649824_04867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004152623.1"
                     /note="TraS, as the term is used in F-like plasmids, is a
                     plasmid entry exclusion protein. It interacts with the
                     F-like plasmid mating stabilization protein TraG; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer entry exclusion protein TraS"
                     /protein_id="WP_004152623.1"
                     /translation="MITNKQILTEVEQLSRLFKDGEADIPSMWNCFWPGLAAMFWLLL
                     WPIAMFSYKLFFVELPNAAQMGIAASVLVAFVAGLFMMLYIVNFRALYLSIPDTYRKQ
                     SALCQFIVGKAKFYCRVYLLTYVFLIISCTYPVYGAIYSTVLFICFSFCLMQIVNVDL
                     SRYQLTALTSLLETFKTSKSEK"
     gene            20110..20841
                     /gene="traT"
                     /locus_tag="D2Z99_RS25875"
                     /old_locus_tag="SAMEA3649824_04868"
     CDS             20110..20841
                     /gene="traT"
                     /locus_tag="D2Z99_RS25875"
                     /old_locus_tag="SAMEA3649824_04868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer complement resistance protein
                     TraT"
                     /protein_id="WP_004152622.1"
                     /translation="MQFNKLMTVMVVSSALALSGCSAMGTAIKKRNLEVKTQMSETIW
                     LEPSNNKTVYLQIKNTSDKDMSGLQAKIASAVTSKGYQVVSNPDTAGYWIQANVLKAD
                     KMDLRESQGWLSRGYEGAVTGAALGAGITAYNSSSAGATLGVGLAAGLVGMAADAMVE
                     DVNYTMITDVQIAERTKTQVQTDNVAVLRQGTSGAKVQTSTETGNQHKYQTRVVSNAN
                     KVNLKFPEAQPVLEDQLAKSIANIL"
     gene            21033..21722
                     /locus_tag="D2Z99_RS29775"
                     /old_locus_tag="SAMEA3649824_04869"
     CDS             21033..21722
                     /locus_tag="D2Z99_RS29775"
                     /old_locus_tag="SAMEA3649824_04869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_022644928.1"
                     /translation="MTISEPVRSLNTHELMPGDIYPHPAVGESYSLSHCEVCSLFSDH
                     FMYICSALVILLLVFIAGVFFRKLMTSSTGRKRDTVSVIPDTKPEAQSKPEYFHLSIC
                     VEGPASTDDSALSSLASRVVREAENLYIPGVNRRDSADDVFAWSVQTQFPSDRLFGTR
                     IFPSTGWFERPDMIKPPVKCYCVCLQYTAETLPSTLHALVDEAGRQVAKSYIKGGHCP
                     GSEGYSFCITS"
     gene            21851..24163
                     /gene="traD"
                     /locus_tag="D2Z99_RS25885"
                     /old_locus_tag="SAMEA3649824_04870"
     CDS             21851..24163
                     /gene="traD"
                     /locus_tag="D2Z99_RS25885"
                     /old_locus_tag="SAMEA3649824_04870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004152630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV conjugative transfer system coupling
                     protein TraD"
                     /protein_id="WP_032072078.1"
                     /translation="MSFNAKDMTQGGQIANMRFRMFGQIANIIFYVLFILFWVLCGLM
                     LMYRLSWQTFVNGCVYWWCTTLGPMRDIIRSQPVYTIQYYGQSLEYTSEQILADKYTI
                     WCGEQLWTGFAFAAVVSLVICIVTFFIASWVLGRQGKQQSEDENTGGRQLSDKPKEVA
                     RQMKRDGVASDIKIGDLPILKNSEIQNFCLHGTVGSGKSEVIRRLLNYVRARGDMAII
                     YDRSCEFVKSYYDPSLDKILNPLDSRCAAWDLWKECLTLPDFDNISNTLIPMGTKEDP
                     FWQGSGRTIFAEGAYLMREDDDRSYEKLVDTMLSIKIDKLRAYLQNTPAANLVEEKIE
                     KTAISIRAVLTNYVKAIRYLQGIEKNGEPFTIRDWMRGVREDRPNGWLFISSNADTHA
                     SLKPVISMWLSIAIRGLLAMGENRNRRVWIFADELPTLHKLPDLVEILPEARKFGGCY
                     VFGIQSYAQLEDIYGVKPAATLFDVMNTRAFFRSPSKEIAEFAAGEIGEKEILKASEQ
                     YSYGADPVRDGVSTGKEKERETLVSYSDIQTLPDLSCYVTLPGPYPAVKLALKYKPRP
                     KIAEGFIPRTLDARVDARLSALLEAREAEGSLARALFTPDAPASGPADTNSHAGEQPE
                     PVSQPAPADMTVSPAPVKAPPTTKMPAEEPSVRATEPSVLRLTTVPLIKPKAAAAAAA
                     AATASSAGTPAAAAGGTEQELAQQSAEQGQDMLPAGMNEDGVIEDMQAYDAWLADEQT
                     QRDMQRREEVNINHSHRHDEQDDVEIGGNF"
     gene            24163..29424
                     /gene="traI"
                     /locus_tag="D2Z99_RS25890"
                     /old_locus_tag="SAMEA3649824_04871"
     CDS             24163..29424
                     /gene="traI"
                     /locus_tag="D2Z99_RS25890"
                     /old_locus_tag="SAMEA3649824_04871"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229687.1"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA];
                     GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA
                     helicase activity [Evidence IEA]; GO:0016818 - hydrolase
                     activity, acting on acid anhydrides, in
                     phosphorus-containing anhydrides [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugative transfer relaxase/helicase TraI"
                     /protein_id="WP_022644926.1"
                     /translation="MMSIGSVKSAGSAGNYYTDKDNYYVIGSMDERWQGKGAEALGID
                     GKAVDKALFTELLKGKLPDGSDLTRIQDGANRHRPGYDLTFSAPKSVSVMAMLGGDKR
                     LIDAHNQAVTEAVRQLETLAATRVMTDGKSETVLTGNLIVAKFNHDTNRNQEPQIHTH
                     AVVINATQNGDKWQSLGTDKIGKTGFIENVYANQIAFGKLYREAFKPLVEKLGYETEV
                     VGKHGMWEMKGVPVEPFSTRSQEVREAAGPDASLKSRDVAALDTRKSKEAIDPAEKMV
                     EWMNTLKETGFDIRGYREAADARAAELARAPAAPVNTDGPDITDVVTKAIAGLSDRKV
                     QFTYADLLARTVGQLEAKDGVFELARKGIDAAIEREQLIPLDREKGLFTSNIHVLDEL
                     AVKALSQEVQRQNHVSVTPDASVVRQVPFSDAVSVLAQDRPVMGIVSGQGGATGQRER
                     VAELTLMAREQGRDVHILAADNRSRDFLAGDVRLAGETVTGKSALQDGTAFIPGGTLI
                     VDQAEKLSLKETISLLDGAMRHNVQVLLSDSGKRSGTGSALTVLKDSGVNTYRWQGGH
                     QTTADIISEPDKGARYSRLAQEFAVSVREGQESVAQISGTREQSVLNGLIRDSLRQEG
                     VLGEKDTTITALTPVWLDSKSRGVRDYYREGMVMERWDPETRTHDRFVIDRVTASSNM
                     LTLKDRDGGRLDLKVSAVDSQWTLFRAETLPVAEGERLAVLGKIPDTRLKGGESVTVM
                     KVEEGQLTVQRPGQKTTQTLAVGAGVFDGIKIGHGWVESPGRSVSETATVFASVTQRE
                     LDNATLNQLAQSGSHLRLYSAQDAARTTEKLSRHTAFSVVSEQLKARSGETDLDAAIA
                     QQKAGLHTPAEQAIHLAIPLLESQDLTFSRPQLLATAMETGGGKVSMADIDTTIQAQI
                     RSGQLLNVPVAHGYGNDLLISRQTWDAEKSILTHVLEGKGAVAPLMDRVPASLMTDLT
                     AGQRAATRMILESTDRFTVVQGYAGVGKTTQFRAVMSAISLLPEETRPRVIGLAPTHR
                     AVGEMQSAGVEARTTASFLHDTQLLQRNGQTPDFSNTLFLLDESSMVGLADMAKAHSL
                     IVAGGGRAVSSGDNDQLPPIAPGQPFRLTQQRSAADVAIMKEIVRQMPELRPAVYSLI
                     ERDVHRALTTIEQVTPEQVPRKEGAWAPGSSVVEFTPKQEKAIEKALSEGKTLPEGQP
                     ATLYEALVKDYTGRTPEAQSQTLVITHLNKDRRALNSLIHDARRENGETGKEEITLPV
                     LVTSNIRDGELRKLSTWTAHKEAVALVDNVYHRISKVDKANQLITLTDSEGKERYISP
                     REASAEGVTLYRQEKITVSQGDRMRFSKSDPERGYVANSIWEVQSVSGDSVTLSDGKL
                     TRTLTPKADQAQQHIDLAYAITAHGAQGASEPYAIALEGVAGGREQMASFESAYVALS
                     RMKQHVQVYTDNREGWIKAIKHSPEKATAHDILEPRNDRAVKTADLLFGRARPLDETA
                     AGRAALQQSGLAQGSSPGKFISPGKKYPQPHVALPAFDKNGKAAGIWLSPLTDRDGRL
                     EAIGGEGRIMGNEDARFVALQNSRNGESLLAGNMGEGVRMARDNPDTGVVVRLAGDDR
                     PWNPGAMTGGRVWAEPAPVAPVPQAGADIILPPEVLAQRAAEEQQRREMEKQAEQTAR
                     EVAGEARKAGEPADRVKEVIGDVIRGLERDRPGTEKTTLPDDPQFRRQEEAIQQVASE
                     RLQRERLQAVERDMVRDLNREKTLGGD"
     gene            29505..30230
                     /gene="traX"
                     /locus_tag="D2Z99_RS25895"
                     /old_locus_tag="SAMEA3649824_04872"
     CDS             29505..30230
                     /gene="traX"
                     /locus_tag="D2Z99_RS25895"
                     /old_locus_tag="SAMEA3649824_04872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system pilin
                     acetylase TraX"
                     /protein_id="WP_032072081.1"
                     /translation="MRAQHTFPGATDRWLHRLLTWTPGQTDMIKTVALVLMVTDHTGL
                     LLAGNNEVMRLLGRGCFPLFGLAWGMNLARHAEIRQSQLNSLWVWALVAQVSFMLIGY
                     PWYTGNILFAFAVTGQVLRWVSQPSWSYTLPAAGLLVAWIPLSTASYGMAGVGMLTAS
                     WLLCRAQHAPERLGYGVLWALMVLLMNMNDLSESVAGLAIALLALMVCSSAGERVKRF
                     WPRQFFVMFYAVHLAVLGIVVSM"
     gene            30387..30980
                     /locus_tag="D2Z99_RS25900"
                     /old_locus_tag="SAMEA3649824_04873"
     CDS             30387..30980
                     /locus_tag="D2Z99_RS25900"
                     /old_locus_tag="SAMEA3649824_04873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fertility inhibition protein FinO"
                     /protein_id="WP_022644924.1"
                     /translation="MSEEKRPVLSLKRKPAENSTAPAEATPVPGVVRRKKVVVVSSPP
                     AWKAKKEKLEKVKQAAEAAARNAAPAPVKAVKTPPPVRYLRLLPPEQAIMTLKAFWPQ
                     LFDGNSPRLLATGMREQLFADIVNRDLPLSHKQVIKCLKSLTRSAGYLSRMKVGASRY
                     DLQGNAVATVTAEEAQYASERMMKELLRAERKMSQTL"
     gene            31141..31743
                     /locus_tag="D2Z99_RS25905"
     CDS             31141..31743
                     /locus_tag="D2Z99_RS25905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="WP_072216873.1"
                     /translation="MTMTEKIIALVDYENIGTLESVRLSRYERLILFTGPQQEFIRFP
                     AVTYAGDISISVFQVANVSKNNVDFHLVFELGRLSATAPKETIFHIISNDKGYDGVIA
                     GLCRAGRRCCRISSPCSAEKPKAASMVISNDEVLHLTDKVQSLSKKSAGNRPANTSSL
                     MNYIKSLSGNTKGMALYGRVKEELIRRGVIAVYEKTVVWR"
     gene            31793..32416
                     /locus_tag="D2Z99_RS25910"
                     /old_locus_tag="SAMEA3649824_04875"
     CDS             31793..32416
                     /locus_tag="D2Z99_RS25910"
                     /old_locus_tag="SAMEA3649824_04875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020315122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_022644923.1"
                     /translation="MFKYFILRAQQQLFCYFCGILLALVLMLLLSPVSRGSEFYLVAL
                     SVALFWAGLALYTRHTDRMRKPEVSPQVHIRDGIQVVAMLPRHEKARLEWEILQDADV
                     YRRQMLALLDLVQRCVSRGLIYAPAVMLAGLCFLAWGFPQDAVRVFSALREMPATDLV
                     HQTGFVLRYVLLISVMSALIADVLAGRGLPNAFRRALLDRLPAEAKE"
     gene            32422..33072
                     /locus_tag="D2Z99_RS25915"
                     /old_locus_tag="SAMEA3649824_04876"
     CDS             32422..33072
                     /locus_tag="D2Z99_RS25915"
                     /old_locus_tag="SAMEA3649824_04876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2726 domain-containing protein"
                     /protein_id="WP_022644922.1"
                     /translation="MAKILMMAGSTIVVLSLLGFLVLLLKGRAVTKTSPVLMSLKALG
                     IRPSEAEQRLCRQRVWVGNDSLMTPREQHFYRALLRHTSRKRWLLCPQVRVADIATLA
                     PHIRPRSRTWWQLFRMASQWHCDVVIVDIRTFAVVGAIELDDASHLKKQRIRRDILLE
                     EVLRQAGIPLLRDRDSEKLVRRVSEFLKYREAETDEISASGTALPTAHTERREDEK"
     gene            33069..33377
                     /locus_tag="D2Z99_RS30055"
                     /old_locus_tag="SAMEA3649824_04877"
     CDS             33069..33377
                     /locus_tag="D2Z99_RS30055"
                     /old_locus_tag="SAMEA3649824_04877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020316912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_022644921.1"
                     /translation="MIVPVEVDRDARGYWTHPALIRSCCQTTPQLMWWLRVQKLECFV
                     MSMRDESTEAFCAGWDDGPPDASAWELVPPPGKGWFLGSVHPREEGPECYWFRHTTKA
                     "
     gene            33475..34032
                     /locus_tag="D2Z99_RS25925"
                     /old_locus_tag="SAMEA3649824_04878"
     CDS             33475..34032
                     /locus_tag="D2Z99_RS25925"
                     /old_locus_tag="SAMEA3649824_04878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020315133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="WP_022644920.1"
                     /translation="MKVNRTLLRWCLPGLVSLSLCAPVPAVYAANIETGFSPEGTALQ
                     LVLKTITTAQQEIRLMGYSFTSPEVVRALVGAKRRGVDVKVVLDHKANTGERNKASRA
                     AMNLLISAGIPVRTVDTYKILHDKVIIADGRNTEVGSFNFSRAADRANSENVLVVWDD
                     PVVAQRYLQHWSSRWSKGTDWKQTY"
     gene            34164..34421
                     /locus_tag="D2Z99_RS25930"
                     /old_locus_tag="SAMEA3649824_04879"
     CDS             34164..34421
                     /locus_tag="D2Z99_RS25930"
                     /old_locus_tag="SAMEA3649824_04879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000078117.1"
                     /GO_process="GO:0006276 - plasmid maintenance [Evidence
                     IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication regulatory protein RepA"
                     /protein_id="WP_022644919.1"
                     /translation="MSQIENAGTSSSKTKRVNRKRQPLSGAEKQKMFVSRKKETHKAI
                     NVFIDKQLKDDLVQLCETTGLTQTQMIERWIQSEKARIFNP"
     gene            34664..34741
                     /gene="tap"
                     /locus_tag="D2Z99_RS25935"
     CDS             34664..34741
                     /gene="tap"
                     /locus_tag="D2Z99_RS25935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020323529.1"
                     /GO_process="GO:0006276 - plasmid maintenance [Evidence
                     IEA]; GO:0031556 - transcriptional attenuation by ribosome
                     [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RepA leader peptide Tap"
                     /protein_id="WP_011201829.1"
                     /translation="MLRKLQYPFLCHLLLPCNISAGRCD"
     gene            34734..35753
                     /gene="repA"
                     /locus_tag="D2Z99_RS25940"
                     /old_locus_tag="SAMEA3649824_04880"
     CDS             34734..35753
                     /gene="repA"
                     /locus_tag="D2Z99_RS25940"
                     /old_locus_tag="SAMEA3649824_04880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020314728.1"
                     /GO_process="GO:0006276 - plasmid maintenance [Evidence
                     IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid replication initiator RepA"
                     /protein_id="WP_032408924.1"
                     /translation="MTEQHNPQHWSQLDTEEQIRFWQGIDDGHVGSFLVSPEKKRTRR
                     RRGEHSTKPKCENPSWFRPSHYKALGGQLGHAYNRLVEKDPATGQCRLRMHMSLHPFY
                     VQERQRAGRRYAFRPEKQRLLDALWPVLVSFCDAGKHTVGMSVSRLARELSPKDARGE
                     VISGTEVTVRRISALIAEQVRFGVLGVSEETLWDRESRKRLPKYVWITPVGWKMLGVD
                     LMKLQEQQLKKLRECEERQALIKEGLLGENEEISVLRARKRWYEQRSREALQYRRAKG
                     AARKRANRLARMPRDRQVYEMTCWLKKTLPADELYGYSADKLEQLAVRHLYQLELSLN
                     PSPPH"
     gene            36769..37674
                     /locus_tag="D2Z99_RS25950"
                     /old_locus_tag="SAMEA3649824_04881"
     CDS             36769..37674
                     /locus_tag="D2Z99_RS25950"
                     /old_locus_tag="SAMEA3649824_04881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004144378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_022644917.1"
                     /translation="MLLTDYIDSVYGTARGNRARFLKDNPDILPQELSRWLKAGLKIR
                     PETGEIYKPVSRRVRIPSAVAAGAGVFLSDDLRERVASLATAQNVTTDAMLNALVERE
                     ELCRKLSLQTENSDAVPEQQIAGIVSRYFSALSERSETGAWHRVLEGLVRELTESGLL
                     SFHTGNIAESRRLNIPRTAYYWYGGFVAKRVAMMLGCYDIYLWNEMMRPDSDVVFVGD
                     ARNVVACYFICQQMCRLLKAVRLNWRKQQGTWGSRAELDEAAHRYTQRLAEGIMDNGI
                     YIGGDEQNSYRLYDYAEKHYAWAMR"
     gene            38043..38624
                     /locus_tag="D2Z99_RS25960"
                     /old_locus_tag="SAMEA3649824_04882"
     CDS             38043..38624
                     /locus_tag="D2Z99_RS25960"
                     /old_locus_tag="SAMEA3649824_04882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016479974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2913 family protein"
                     /protein_id="WP_032408940.1"
                     /translation="MRNMEKTGHLAWCALIALLTAREDGLVASESQENLFITRWFAQV
                     KKQRRFSRDVATDVDWILNQGRTLGVRARLRHKLDYLWRSCTGELSEQNDLFRLTYAL
                     ELAKQYDWGYHVLSDSEWSGRNKILPSASVNSICLLKSALDIGFNDDGTQVLPVPARI
                     GGRAEGLNALLKSCGWEAVSNDDHWKLVTISAG"
     gene            complement(38664..39617)
                     /locus_tag="D2Z99_RS25965"
                     /old_locus_tag="SAMEA3649824_04883"
     CDS             complement(38664..39617)
                     /locus_tag="D2Z99_RS25965"
                     /old_locus_tag="SAMEA3649824_04883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006122138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="WP_022644915.1"
                     /translation="MSGRKGKGGKSPVPHDGLFKTFLTHTDTARDFLALHLPAELLQL
                     CDLTTLQLESGSFIEENLRTYFADVLYSLKTTEGEGYIYTLIEHQSSPDRHMAFRLMR
                     YSIAAMQKHLDAGHEQLPLVIPLLFSHGRGSPWPWTLNWTELFASPETARKLYTGDFP
                     LIDVGAIDDDEIMKHRRMALLELMLKHAQTRDLAELTEHLVTLLIAGYTTDEQLVTVM
                     NWMLQTGDTARPEAFLQELARRSPQHEEILMTIAQRLEQKAREEGIQLGEQRGIEKGR
                     SEGEREATLRIARTMLQSGIDRNTVMAMTGLTEEDLQRITH"
     gene            complement(39725..40312)
                     /locus_tag="D2Z99_RS25970"
                     /old_locus_tag="SAMEA3649824_04884"
     CDS             complement(39725..40312)
                     /locus_tag="D2Z99_RS25970"
                     /old_locus_tag="SAMEA3649824_04884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000091963.1"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA];
                     GO:0000150 - DNA strand exchange activity [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="WP_022644914.1"
                     /translation="MSRVFAYCRVSTLEQTTENQRREIEAAGFTVKPQRLIEEQISGS
                     VAASERPGFARLLDRMENDDVLIVTKLDRLGRDAMDVRKTVEQLAASGIRVHCLALGG
                     VDLTSAAGKMTMQVISAVAEFEKDLLIERTHSGLARARAAGKRFGRPPALNNEQRQTA
                     LEQLKAGASISAVARQLGTSRQTIMRLRDDAVSSE"
     gene            40852..41370
                     /locus_tag="D2Z99_RS25980"
                     /old_locus_tag="SAMEA3649824_04885"
     CDS             40852..41370
                     /locus_tag="D2Z99_RS25980"
                     /old_locus_tag="SAMEA3649824_04885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_022644913.1"
                     /translation="MYVKPTDVLSPRGHVEVLDVLYDAGEWDVSVARINYRDELNQPF
                     SECTGIRWNGNLDEGSKGMPLSRGYPVWFVIPKEFAACIQARALELNTDNIPAVIAEI
                     KMKVESERASNPNTYMLEYKTARQLSETDVDAILGGLKDVGIFEAFTEGAHTIDINGV
                     HTLMLMFPAKRK"
     gene            41700..42347
                     /locus_tag="D2Z99_RS25985"
                     /old_locus_tag="SAMEA3649824_04886"
     CDS             41700..42347
                     /locus_tag="D2Z99_RS25985"
                     /old_locus_tag="SAMEA3649824_04886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000633910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="WP_022644912.1"
                     /translation="MITVIGSNKGGASKSTTATNIAIALALRGKDVCLLDADLQSSAA
                     KWHASREEADLLPRITLIQKYGNISQTLRQLDEKFDHVIVDVAGRNSRELANAGAVAD
                     IIIAPHLCSQFDLDTLEELEGQLEAWQDLNPDLNLYMYQTRATTNPVLRGKERAEFLE
                     YLKDFPTLPPLNAINCERKIYRDVVPLGKSVLEATNRTAIEEVEQLIEEVYSKWL"
     gene            42338..42613
                     /locus_tag="D2Z99_RS25990"
     CDS             42338..42613
                     /locus_tag="D2Z99_RS25990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004150689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_032072061.1"
                     /translation="MALKPRSAKKPSDAQVAALADKLADKQYGGAAPIVKTEKTVQRS
                     LALPLSLDQAITRVSAENKLSGSGPKNTSAVIREALEQYLERRNSDN"
     gene            complement(42806..43006)
                     /locus_tag="D2Z99_RS25995"
                     /old_locus_tag="SAMEA3649824_04887"
     CDS             complement(42806..43006)
                     /locus_tag="D2Z99_RS25995"
                     /old_locus_tag="SAMEA3649824_04887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017694174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_022644911.1"
                     /translation="MDRGMLAEWLRDIAQHIEEESPLIRDVSVDDALSDEGLAKKIIT
                     ITFNAPGRVIQTEEDVSSIPRH"
     gene            complement(43108..44379)
                     /locus_tag="D2Z99_RS26000"
                     /old_locus_tag="SAMEA3649824_04888"
     CDS             complement(43108..44379)
                     /locus_tag="D2Z99_RS26000"
                     /old_locus_tag="SAMEA3649824_04888"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000457545.1"
                     /GO_function="GO:0003684 - damaged DNA binding [Evidence
                     IEA]; GO:0003887 - DNA-directed DNA polymerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006974 - DNA damage response [Evidence
                     IEA]; GO:0042276 - error-prone translesion synthesis
                     [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA];
                     GO:0019985 - translesion synthesis [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Y-family DNA polymerase"
                     /protein_id="WP_022644910.1"
                     /translation="MFALADVNSFYASCEKVFRPDLRGKPVICLSNNDGCVIARSREA
                     RDIGIPMGAPWFKVKALAEKHHVAVFSSNYSLYHSFSERVMRCLEALAPRVEQYSIDE
                     MFLDVAGIDSCIAFEDFGRQLREHVLRHTALTIGVGMGPTKTLAKSAQWASKEWPQFG
                     GVLALTRGNPRQTEKLLSLQPVEEIWGVGRRISKKLNTMGITTALQLARANPTFIRKN
                     FNVVLERTVRELNGESCISLEEAPPPKQQIVCSRSFGERITEYDAMRQAVCQYAERAA
                     EKLRSERQYCRHIAVFVKTSPFAVKEPYYGNMASESLPFPSRDSRDIIAAAVRALGHI
                     WVPGHRYAKAGVMLNDFTPAGGSQLSLFDDVQPRANSEALMNVVDGINHSGLGKVWFA
                     GRGIAPEWQMKREMLSPAYTTRWTDLPVAHL"
     gene            complement(44391..44840)
                     /gene="umuD"
                     /locus_tag="D2Z99_RS26005"
                     /old_locus_tag="SAMEA3649824_04889"
     CDS             complement(44391..44840)
                     /gene="umuD"
                     /locus_tag="D2Z99_RS26005"
                     /old_locus_tag="SAMEA3649824_04889"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004144457.1"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translesion error-prone DNA polymerase V
                     autoproteolytic subunit"
                     /protein_id="WP_044596206.1"
                     /translation="MSRREPLFDPEAVFTLPATPSSQQIPLFADACAAGFPSPAGDYV
                     EQELDLNSLCIRHPAATYFLRASGESMRDLGLYDGDILVVDRAEKAVDGDVVIAEVDG
                     GFTVKRLRLTPRPALEPMNPAYPTLWPEELTLFGVVMHFIHRTRARL"
     gene            complement(44837..45082)
                     /locus_tag="D2Z99_RS26010"
                     /old_locus_tag="SAMEA3649824_04890"
     CDS             complement(44837..45082)
                     /locus_tag="D2Z99_RS26010"
                     /old_locus_tag="SAMEA3649824_04890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020314635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinI-like family protein"
                     /protein_id="WP_022644908.1"
                     /translation="MLQISVRFSPEQVKAMRSGTFAALQQEIERRLTPRYPHLWLNIG
                     KSSQTALDVSGARSDQEKSDIMNTLEAIWQDDTWLPE"
     gene            45286..45516
                     /locus_tag="D2Z99_RS26015"
                     /old_locus_tag="SAMEA3649824_04891"
     CDS             45286..45516
                     /locus_tag="D2Z99_RS26015"
                     /old_locus_tag="SAMEA3649824_04891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_022644907.1"
                     /translation="MSPGFRNVLRFAGVPVDSSEPVRRQYGSRMIGIVTVCLLPLLVF
                     DVPLWVFVLSQVIWGAGVYIGLSVAGDKTRSR"
     gene            45952..46884
                     /locus_tag="D2Z99_RS26020"
                     /old_locus_tag="SAMEA3649824_04892"
     CDS             45952..46884
                     /locus_tag="D2Z99_RS26020"
                     /old_locus_tag="SAMEA3649824_04892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001134287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1281 domain-containing protein"
                     /protein_id="WP_022644906.1"
                     /translation="MPNWCANRLTFSGIQQHADELKSWVRGEQLSLPGRAKREGIQLF
                     LAGCAGLLRPDTVSPYLPCPALTASGVATESTPASQAFTRWLAMFTAGAELDTDTCQT
                     LHQCWLDSGISRLRWNRLDEYAMAVIERLYRQKSCDWSDIFRPQDPESWWNTLCDGEE
                     NADCGAPMDFRLVLPTRLDIEVNGFNGGLLDGIPSSYSHYISQYGCKWPVGYDMNICF
                     DGDTSLTVDFDTPWSPVSEDVVAALSLRYGAEIEHWYAEQGCDYCGYGRYSNGDITER
                     LSDSLEWGEPDPEDDYPDVTGPDWIINNFARFGG"
     gene            <46919..47152
                     /locus_tag="D2Z99_RS26025"
                     /old_locus_tag="SAMEA3649824_04893"
                     /pseudo
     CDS             <46919..47152
                     /locus_tag="D2Z99_RS26025"
                     /old_locus_tag="SAMEA3649824_04893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_490546.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            47149..47484
                     /locus_tag="D2Z99_RS26030"
                     /old_locus_tag="SAMEA3649824_04894"
     CDS             47149..47484
                     /locus_tag="D2Z99_RS26030"
                     /old_locus_tag="SAMEA3649824_04894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_022644905.1"
                     /translation="MNTWLVGFAVEISGVEMMVHHMISATGLAQAESGAIQMGRTWWD
                     NLLLEDDRHCWQYPDGVVWFNSIILLDDVESSILRGLKFLDTWAVTGVTDTPGLCDEY
                     GNDWRDITR"
CONTIG      join(UIZG01000031.1:1..47711)
//
<1..1260
/gene="traB"
/locus_tag="D2Z99_RS25750"
/old_locus_tag="SAMEA3649824_04844"
/inference="COORDINATES: similar to AA
sequence:RefSeq:YP_005229715.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="F-type conjugal transfer pilus assembly protein
TraB"
/protein_id="WP_116954364.1"
/translation="GVVDSSFNSKVEQHATTEMQATAADLNKRFDSLQGEVDLLSKAR
TADQIRIDKLSSDNEAMQTQLKALGVKPAVSGGEPAPTPPSPPPGPEGEPQPASYPPQ
TGAAVPPPTAFYPGNGMTPPPQVSYQSVPVPNQIQRKTFSYDKGKKTKSLPYIPSGSF
AKSMLIEGADANASVTGNESTVPMQLRITGRVEMPNSKTYDLTGCFVGLEAWGDVSSE
RAIVRTRNISCIKGDKTIDQPINGHVSFMGKNGVKGEVVMRNGKILGWAWGAGFVDGI
GQGMERASQPAVGLGATASVGAGDVLKMGVGGGASKAAQTLSEYYIKRAEQYHPVIPI
GAGNEVTVVFQDGFQLKTIEELEAEKNGQQQAQNQEAGPAPQADAHHQSGGGMNGFNT
DEMLKKLGKLDPREFSPGAAPQGENNG"
Warning: Cannot highlight feature because no sequence is shown. Show the sequence
Feature NZ_UIZG01000031 : 1 segment
Display: FASTA GenBank Help
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