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GenBank: THE56798.1
Identical Proteins FASTA Graphics
LOCUS THE56798 146 aa linear BCT 18-APR-2019 DEFINITION type III secretion system invasion protein IagB [Enterobacter bugandensis]. ACCESSION THE56798 VERSION THE56798.1 DBLINK BioProject: PRJNA497272 BioSample: SAMN10252912 DBSOURCE accession RDOI01000001.1 KEYWORDS . SOURCE Enterobacter bugandensis ORGANISM Enterobacter bugandensis Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Enterobacter. REFERENCE 1 (residues 1 to 146) AUTHORS Matteoli,F.P. TITLE E. bugandensis sequencing JOURNAL Unpublished REFERENCE 2 (residues 1 to 146) AUTHORS Matteoli,F.P. TITLE Direct Submission JOURNAL Submitted (17-OCT-2018) LQFPP, UENF, Avenida Alberto Lamego, Campos dos Goytacazes, Rio de Janeiro 28013600, Brazil COMMENT Bacteria and source DNA available from Fabio Olivares. Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 16-OCT-2018 Assembly Method :: SPAdes v. 3.9 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 360.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 10/19/2018 16:56:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 4,630 CDS (total) :: 4,539 Genes (coding) :: 4,447 CDS (coding) :: 4,447 Genes (RNA) :: 91 rRNAs :: 6, 3, 2 (5S, 16S, 23S) complete rRNAs :: 6, 1, 1 (5S, 16S, 23S) partial rRNAs :: 2, 1 (16S, 23S) tRNAs :: 72 ncRNAs :: 8 Pseudo Genes (total) :: 92 Pseudo Genes (ambiguous residues) :: 0 of 92 Pseudo Genes (frameshifted) :: 47 of 92 Pseudo Genes (incomplete) :: 36 of 92 Pseudo Genes (internal stop) :: 32 of 92 Pseudo Genes (multiple problems) :: 20 of 92 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..146 /organism="Enterobacter bugandensis" /strain="UENF-21GII" /isolation_source="Vermicompost" /db_xref="taxon:881260" /geo_loc_name="Brazil: Campos dos Goytacazes" /lat_lon="21.46 S 41.18 W" /collection_date="2014-04-10" /collected_by="Nudiba-UENF" Protein 1..146 /product="type III secretion system invasion protein IagB" Region 1..146 /region_name="Lyz-like" /note="lysozyme-like domains; cl00222" /db_xref="CDD:469668" Site order(41,63..65,68,96,114..115) /site_type="other" /note="putative sugar binding site [chemical binding]" /db_xref="CDD:381603" CDS 1..146 /gene="iagB" /locus_tag="EAI35_03025" /coded_by="RDOI01000001.1:621735..622175" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_006809423.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 ORIGIN 1 mkkfilllli ishgalancw nnaahyyhvd pyllyaianv esgmnpyavg qnhdgtrdvg 61 lmqinsshft elerkgidey rlmaepctsi mvgasilsnm ikvygynwea vgaynaglkr 121 enypqrmmya hkvwkkyqel klaary //
Whole sequence Selected region from: to:
Conserved Domains
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