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GenBank: TWY22862.1
Identical Proteins FASTA Graphics
LOCUS TWY22862 221 aa linear BCT 10-AUG-2019 DEFINITION DUF1190 family protein [Enterobacter roggenkampii]. ACCESSION TWY22862 VERSION TWY22862.1 DBLINK BioProject: PRJNA558366 BioSample: SAMN12438177 DBSOURCE accession VOMK01000008.1 KEYWORDS . SOURCE Enterobacter roggenkampii ORGANISM Enterobacter roggenkampii Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex. REFERENCE 1 (residues 1 to 221) AUTHORS Jeong,K.C. TITLE Enterobacter cloacae from clinical samples JOURNAL Unpublished REFERENCE 2 (residues 1 to 221) AUTHORS Jeong,K.C. TITLE Direct Submission JOURNAL Submitted (02-AUG-2019) Animal Sciences at the Emerging Pathogens Institute, University of Florida, 2055 Mowry Rd, Gainesville, FL 32611, USA COMMENT Bacteria and source DNA available from Emerging Pathogens Institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 38.0x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 08/05/2019 18:12:32 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 5,078 CDSs (total) :: 4,971 Genes (coding) :: 4,796 CDSs (with protein) :: 4,796 Genes (RNA) :: 107 rRNAs :: 9, 8, 6 (5S, 16S, 23S) complete rRNAs :: 7 (5S) partial rRNAs :: 2, 8, 6 (5S, 16S, 23S) tRNAs :: 78 ncRNAs :: 6 Pseudo Genes (total) :: 175 CDSs (without protein) :: 175 Pseudo Genes (ambiguous residues) :: 0 of 175 Pseudo Genes (frameshifted) :: 66 of 175 Pseudo Genes (incomplete) :: 102 of 175 Pseudo Genes (internal stop) :: 32 of 175 Pseudo Genes (multiple problems) :: 22 of 175 CRISPR Arrays :: 3 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..221 /organism="Enterobacter roggenkampii" /strain="KCJ3K345" /host="Homo sapiens" /db_xref="taxon:1812935" /geo_loc_name="USA" /lat_lon="29.6436 N 82.3549 W" /collection_date="Mar-2018" /collected_by="Emerging Pathogens Institute" Protein 1..221 /product="DUF1190 family protein" Region 1..221 /region_name="PRK11653" /note="DUF1190 family protein" /db_xref="CDD:236948" CDS 1..221 /locus_tag="FR969_05440" /coded_by="VOMK01000008.1:97412..98077" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_457579.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 ORIGIN 1 mkrtktinha sfrkswnarh ltpvalavta vfmlagcekn detvslyqna ddcsaatgka 61 aecktaytna lkeaertapk yasredcvae fgegqcqqap aqagtapenq aqaqssgsfw 121 mplmagymmg rlmgggagyq qqplfssknp aspaygqytd asgkgygaat pgrtvtvpkt 181 amapkpatts titrggfges vakqtsmqrs asgtstrsmg g //
Whole sequence Selected region from: to:
Conserved Domains
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