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PREDICTED: Homo sapiens coiled-coil domain containing 83 (CCDC83), transcript variant X3, mRNA

NCBI Reference Sequence: XM_011544841.2

FASTA Graphics 

LOCUS       XM_011544841            1925 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens coiled-coil domain containing 83 (CCDC83),
            transcript variant X3, mRNA.
ACCESSION   XM_011544841
VERSION     XM_011544841.2
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000011.10) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011544841.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1925
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="11"
     gene            1..1925
                     /gene="CCDC83"
                     /gene_synonym="CT148; HSD9; KP-CoT-23"
                     /note="coiled-coil domain containing 83; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 10 long SRA reads, 4 Proteins, and 93%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 4 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:220047"
                     /db_xref="HGNC:HGNC:28535"
     CDS             88..1422
                     /gene="CCDC83"
                     /gene_synonym="CT148; HSD9; KP-CoT-23"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 83 isoform
                     X1"
                     /protein_id="XP_011543143.1"
                     /db_xref="GeneID:220047"
                     /db_xref="HGNC:HGNC:28535"
                     /translation="MENSGKANKKDTHDGPPKEIKLPTSEALLDYQCQIKEDAVEQFM
                     FQIKTLRKKNQKYHERNSRLKEEQIWHIRHLLKELSEEKAEGLPVVTREDVEEAMKEK
                     WKFERDQEKNLRDMRMQISNAEKLFLEKLSEKEYWEEYKNVGSERHAKLITSLQNDIN
                     TVKENAEKMSEHYKITLEDTRKKIIKETLLQLDQKKEWATQNAVKLIDKGSYLEIWEN
                     DWLKKEVAIHRKEVEELKNAIHELEAENLVLIDQLSNCRLVDLKIPRYPVLHSCPTSN
                     PRHLLLLPLESCLISARRCWRLYLTQAAGLEVPPEEMSLELPETHIEEKSELQPTEVE
                     SRDLMSSSDESTILHLSHENSIEDLQYVKIDKEENSGTEFGDTDMKYLLYEDEKDFKD
                     YVNLGPLGVKLMSVESKKMPIHFQEKEIPVKLYKDVRSPESHITYKMMKSFL"
ORIGIN      
        1 ggattgcctt acagccacct ccagaagatc ctctttagac tcactactgc tatttgaagg
       61 tatatttctt catagctaac cagcacaatg gaaaactcag ggaaagcaaa taaaaaggat
      121 acacatgacg ggccaccaaa agaaattaaa ctgcctacca gtgaagcact tctagactat
      181 caatgtcaaa taaaggaaga tgccgtggag caattcatgt ttcaaataaa gacacttagg
      241 aaaaagaacc aaaaatatca tgaaagaaat agccgcttaa aagaagaaca gatttggcac
      301 atacggcatc tactaaagga actgagtgaa gagaaggcag agggattgcc agttgtaaca
      361 agagaggatg ttgaagaagc gatgaaggaa aaatggaagt ttgaaagaga ccaggaaaaa
      421 aacttgagag atatgcgcat gcaaataagt aatgctgaga aactatttct tgagaaactc
      481 agtgaaaagg aatattggga ggagtacaag aatgtaggga gtgaacgaca tgctaaactc
      541 attacctcct tacaaaatga catcaacaca gttaaagaga atgcagagaa aatgtcagaa
      601 cactataaaa tcactctgga agatactaga aagaaaataa tcaaggaaac tttgttgcaa
      661 ctggaccaaa agaaggaatg ggccacacag aatgctgtaa agctcattga caagggcagt
      721 tatctagaga tctgggagaa tgactggctc aaaaaagagg ttgcaattca caggaaggaa
      781 gttgaagaat taaaaaatgc tattcatgaa ctggaagcag aaaatttggt gcttattgat
      841 caactatcca actgtagact tgtggatctc aagataccca ggtatccagt gctacattcc
      901 tgtcccacct ctaatcctcg tcatctgctg ctgctgcctt tggaatcatg tctaatctct
      961 gccaggcgtt gctggcgact atatcttacc caagctgctg gactagaagt gccacctgaa
     1021 gaaatgtctt tggaattgcc agaaacacat atagaagaga agtcagaatt gcaacccaca
     1081 gaagtagaaa gtagagactt gatgtcctca tcagatgaga gcactatctt acatcttagt
     1141 catgaaaata gcatcgaaga tctccagtat gtgaagatag ataaagagga aaactcaggc
     1201 acagagtttg gggacactga tatgaagtac ttactatatg aggatgagaa ggatttcaag
     1261 gattatgtaa acttgggccc cctgggagtg aagcttatga gtgtggagag caagaaaatg
     1321 cccattcatt ttcaagagaa ggaaattcca gtcaaactct ataaagatgt caggagccca
     1381 gaaagccaca tcacatataa gatgatgaag tcttttctct aagacggaaa gctgcaaagg
     1441 aaacacaact tttccttata aatgttcttt gggaactgaa gtatatccgt tgcccatttt
     1501 acttacactt tggctcattt ttaaaccagc tgttatttct aaaggtcata tttacattta
     1561 aaatcaaagg tattcagcta ttcatttact tgcatggtat gagtgaccaa aacggaagca
     1621 cgctttgtat ttctacactg aagtattcag aagcatgaca gtgggttcaa ggtagtctct
     1681 gaggttcctt ttcacacaca aaaaattcac tgattaatct gtgattccag tatgaaatag
     1741 ttccattaga aatgtttcta agaaaaactt agaagtttgc atagcattgt ctacacatct
     1801 ttccctctga ggatgctcaa tgtgatagac agccagtcta taatgcaagc caattctccg
     1861 tagtttaacc ctgtgtatta gtctgttctc atgctgctaa taaagacata attgaaactg
     1921 ggtaa
//
88..1422
/gene="CCDC83"
/gene_synonym="CT148; HSD9; KP-CoT-23"
/codon_start=1
/product="coiled-coil domain-containing protein 83 isoform
X1"
/protein_id="XP_011543143.1"
/db_xref="GeneID:220047"
/db_xref="HGNC:HGNC:28535"
/translation="MENSGKANKKDTHDGPPKEIKLPTSEALLDYQCQIKEDAVEQFM
FQIKTLRKKNQKYHERNSRLKEEQIWHIRHLLKELSEEKAEGLPVVTREDVEEAMKEK
WKFERDQEKNLRDMRMQISNAEKLFLEKLSEKEYWEEYKNVGSERHAKLITSLQNDIN
TVKENAEKMSEHYKITLEDTRKKIIKETLLQLDQKKEWATQNAVKLIDKGSYLEIWEN
DWLKKEVAIHRKEVEELKNAIHELEAENLVLIDQLSNCRLVDLKIPRYPVLHSCPTSN
PRHLLLLPLESCLISARRCWRLYLTQAAGLEVPPEEMSLELPETHIEEKSELQPTEVE
SRDLMSSSDESTILHLSHENSIEDLQYVKIDKEENSGTEFGDTDMKYLLYEDEKDFKD
YVNLGPLGVKLMSVESKKMPIHFQEKEIPVKLYKDVRSPESHITYKMMKSFL"
Feature XM_011544841 : 1 segment
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