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PREDICTED: Homo sapiens RNA binding motif protein 44 (RBM44), transcript variant X8, mRNA

NCBI Reference Sequence: XM_054341924.1

FASTA Graphics 

LOCUS       XM_054341924            2888 bp    mRNA    linear   PRI 26-AUG-2024
DEFINITION  PREDICTED: Homo sapiens RNA binding motif protein 44 (RBM44),
            transcript variant X8, mRNA.
ACCESSION   XM_054341924
VERSION     XM_054341924.1
DBLINK      BioProject: PRJNA807723
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_060926) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_009914755.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2888
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /isolate="CHM13"
                     /db_xref="taxon:9606"
                     /chromosome="2"
                     /sex="female"
                     /cell_line="CHM13htert"
                     /tissue_type="hydatidiform mole"
                     /note="haploid cell line"
     gene            1..2888
                     /gene="RBM44"
                     /note="RNA binding motif protein 44; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     ESTs, 11 long SRA reads, 1 Protein, and 97% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 7 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:375316"
                     /db_xref="HGNC:HGNC:24756"
     CDS             601..1899
                     /gene="RBM44"
                     /codon_start=1
                     /product="RNA-binding protein 44 isoform X6"
                     /protein_id="XP_054197899.1"
                     /db_xref="GeneID:375316"
                     /db_xref="HGNC:HGNC:24756"
                     /translation="MDDLGLNNLVLCTQLLNRNLSSNSAKKELGSALLSLLGDLKVRY
                     VTLKEKIHKGIPLEELPPLSLESKLLSTFSTFASRLMKKETHVFSEADAEQDNQRAHD
                     VDVSSNLKKTLSQMSLSSDNSHATQNISPKKDDFKNGDINADFSQLKLGDKDCRHYQE
                     TSEDWSDAKESLTGVDVSGTQGNQVEQDTWNLDLTGAEMKNVEPSQRDKGYLIHVGGL
                     CPSVSEADLRSHFQKYQVSEISIYDSTNYRYASLAFTKNSDAKIAVKEMNGIEINGKS
                     VNVWPVKILGEYTSPLSSKNGNRISSNNLEKSTNKQIHSEFSISRLPRTRPRQLGSEQ
                     DSEVFPSDQGVKKNCKQIESAKLLPDTPVQFIPPNTLNLRSFTKIIKRLAELHPEVSR
                     DHIINALQEVRIRHKGFLNGLSITTIVEMTSSLLKNSASS"
     polyA_site      2888
                     /gene="RBM44"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agtttctcta attttcattt ttgaagagta aaatgaggag tagattgtta ctgggtttgt
       61 tagttagcct aagggtaata gaacccttga gtttcatgga ggggccacag tgcgtggttg
      121 gcatgatgaa tccagtgaaa acatagattt gttttttctt tataaagttc aagtaaggat
      181 gaacttagag agtttttgca tgacatgcta ccacacgttc tctggcttat gtgtcaagag
      241 ttgtttgtac tgcctttaga aaaacatatt tactgtggtt catttttttc ttttactcag
      301 catttaaaag aaaatattta gagttctagt aaaattagaa ccaagtgggg ttgggcaagg
      361 tggcttgtgc ctgtaatccc agcactttgg gaagctgagg caggagaatc acttaaggcc
      421 aagagttcaa gaccaatgtg ggcaacataa taggaccccc gtctctacaa tacatttttt
      481 tacaaattag ctgggcattg tggcacacat gtagtcctag caacttgcga ggctgagaca
      541 ggaggattgc ttgagcccag gagttcaaga accaagtgta taatataata ttagtgttaa
      601 atggatgact taggcctaaa taatttagtt ttgtgcactc aacttttgaa caggaattta
      661 tcaagtaatt ctgctaagaa ggaattggga tcagcactac tgtctctttt gggggactta
      721 aaagttagat atgtgacttt gaaagaaaaa atacacaaag gcataccact ggaagagctg
      781 cccccactgt cactagaatc aaaattatta tctaccttct ctacttttgc ttccaggcta
      841 atgaaaaaag aaacacatgt cttttcagaa gcagatgctg aacaagataa tcagagggct
      901 catgatgttg atgtttcttc aaacctaaaa aagacactct ctcaaatgtc tttatcatct
      961 gacaatagtc atgctacaca aaacatatca cccaagaaag atgactttaa aaatggtgat
     1021 ataaatgcag actttagtca actgaaactt ggtgataaag actgcagaca ttaccaagag
     1081 acaagcgaag actggtctga tgctaaagag agcctgacag gagttgacgt ctcagggaca
     1141 cagggaaatc aagtagaaca agacacatgg aatttggatc ttacaggagc agaaatgaag
     1201 aatgttgaac cctcacaaag agataaaggt tatttgatac atgttggtgg cctctgccct
     1261 tcagtatctg aggccgattt aaggtctcat ttccaaaaat accaagtttc tgaaatttca
     1321 atttatgatt ctactaatta cagatatgca tctcttgctt ttacaaaaaa cagcgatgca
     1381 aagatagctg tgaaagaaat gaatgggata gaaataaatg gaaagtcagt aaatgtgtgg
     1441 cctgttaaaa ttcttggaga atatacatca ccactttcct ccaaaaatgg gaatagaatt
     1501 agttcgaata atttagagaa aagcaccaac aaacaaatcc actcagaatt ctccatttct
     1561 agattgccca gaactaggcc acggcagctg ggttctgagc aagacagtga ggttttccct
     1621 tccgaccagg gtgtcaagaa gaattgtaag cagattgaat ctgctaaatt attacctgat
     1681 acacccgttc aattcatacc tccaaataca ttgaaccttc gtagctttac caagatcata
     1741 aagagactgg ctgaactgca tccagaagtc agcagagacc atattataaa tgcacttcag
     1801 gaagtgagaa taagacataa aggttttctg aatggcttat ctattactac tattgtggag
     1861 atgacttcat ctcttctgaa aaactctgct tccagttagg aattcaaaaa acaataaaga
     1921 gaacttcctt ggaaagtgtg tttcctcctt cagagaatgt tctacagcac ttaggaaaaa
     1981 gtagtaataa caagatgatg taattaaata ggctctataa atgggctaag ctgttaaaat
     2041 attctacttt atatccctcc tttaaaatct agcaacagtt gtctatacaa tattaagatc
     2101 ttctctatat atttaaagtt aaaatataat ttttaataag tttttaaatt tttttatttc
     2161 aattttgtta cttagaacat taagatgcat atttgtgatc taaagaaatt gtcttgtcca
     2221 ttttaaaaac ctttattaag tcacttttaa aatgtattga ccaagaagga ggtttgttgt
     2281 tacatcaatg tttgtgaaat gatttccata cataaaaaat gtaatttacc tgaactttgt
     2341 cttaagactc ttacattgga ttataggata acagataaat aaactgtata gatacattca
     2401 gtatcataca acattttgga atgtgtatgc tttcaggctt ccaagataat taaattactg
     2461 tcatgataca tttcatgcat tttttatgac ttcagtataa aacattcagg tgtgttagcc
     2521 ttccctggga agggtaaact tgtatgtgct ttggtaaagt acttaaattc caatgttccc
     2581 tatagtgctt gcattcattt tgtgaaaagt tttgttgtat tgttagaaca attttcaaag
     2641 gctgatttta tgccttatct gatagaaata tagaatagat agttctttaa ttgcttactt
     2701 tttaaaagta atataatatt taagttgcat ttttattaat agtaagatta acatttaagt
     2761 ctgcattttc tttaaatgtt ttaaatgttt atagcattca atgtgtagtt ggatttactt
     2821 gactaaaaat tagcccttta acgtttatat ttgttgtatt tatatttaat aaaggcatct
     2881 aatcttta
//
601..1899
/gene="RBM44"
/codon_start=1
/product="RNA-binding protein 44 isoform X6"
/protein_id="XP_054197899.1"
/db_xref="GeneID:375316"
/db_xref="HGNC:HGNC:24756"
/translation="MDDLGLNNLVLCTQLLNRNLSSNSAKKELGSALLSLLGDLKVRY
VTLKEKIHKGIPLEELPPLSLESKLLSTFSTFASRLMKKETHVFSEADAEQDNQRAHD
VDVSSNLKKTLSQMSLSSDNSHATQNISPKKDDFKNGDINADFSQLKLGDKDCRHYQE
TSEDWSDAKESLTGVDVSGTQGNQVEQDTWNLDLTGAEMKNVEPSQRDKGYLIHVGGL
CPSVSEADLRSHFQKYQVSEISIYDSTNYRYASLAFTKNSDAKIAVKEMNGIEINGKS
VNVWPVKILGEYTSPLSSKNGNRISSNNLEKSTNKQIHSEFSISRLPRTRPRQLGSEQ
DSEVFPSDQGVKKNCKQIESAKLLPDTPVQFIPPNTLNLRSFTKIIKRLAELHPEVSR
DHIINALQEVRIRHKGFLNGLSITTIVEMTSSLLKNSASS"
Feature XM_054341924 : 1 segment
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